BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022928
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus ...    53   1e-08
ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus ce...    52   3e-08
ref|YP_740175.1| hypothetical protein RF1 [Daucus carota] gi|118...    52   5e-08
ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68...    47   9e-06

>ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus senticosus]
           gi|347448265|gb|AEO92677.1| ycf1 protein (chloroplast)
           [Eleutherococcus senticosus]
          Length = 1875

 Score = 52.8 bits (125), Expect(2) = 1e-08
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
 Frame = +2

Query: 41  SMEVNKIHS-LLPDTDYHEFEQKIDRFDTKIF 133
           +ME+NKIH+ LLPDTDY EFEQKID FD KIF
Sbjct: 535 TMEINKIHNILLPDTDYQEFEQKIDPFDKKIF 566



 Score = 31.6 bits (70), Expect(2) = 1e-08
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +3

Query: 138 LFTLISKLDRESGSSL 185
           LFTLISK DRESGSSL
Sbjct: 573 LFTLISKFDRESGSSL 588


>ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus cerefolium]
           gi|289645633|gb|ADD13696.1| hypothetical chloroplast
           RF19 [Anthriscus cerefolium]
          Length = 1793

 Score = 52.0 bits (123), Expect(2) = 3e-08
 Identities = 25/32 (78%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query: 41  SMEVNKIHSLL-PDTDYHEFEQKIDRFDTKIF 133
           +ME+NKIHSLL PDTDY EFEQKID FD K F
Sbjct: 504 TMEINKIHSLLLPDTDYQEFEQKIDLFDKKTF 535



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
 Frame = +3

Query: 114 DLIQKSFF------LFTLISKLDRESGSSLVVVCYMKR 209
           DL  K  F      LFTLISK DRESGS  V+  + ++
Sbjct: 528 DLFDKKTFSTENRHLFTLISKFDRESGSRKVLSLFSEK 565


>ref|YP_740175.1| hypothetical protein RF1 [Daucus carota]
           gi|118574747|sp|Q0G9Q4.1|YCF1_DAUCA RecName:
           Full=Putative membrane protein ycf1
           gi|113200966|gb|ABI32482.1| hypothetical protein RF1
           [Daucus carota]
          Length = 1826

 Score = 52.0 bits (123), Expect(2) = 5e-08
 Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
 Frame = +2

Query: 41  SMEVNKIHSLL-PDTDYHEFEQKIDRFDTKIF 133
           ++E+NKIHSLL PDTDY EFEQKID+FD K F
Sbjct: 507 TLEINKIHSLLLPDTDYQEFEQKIDQFDKKTF 538



 Score = 30.0 bits (66), Expect(2) = 5e-08
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 138 LFTLISKLDRESGS 179
           LFTLISKLDRESGS
Sbjct: 545 LFTLISKLDRESGS 558


>ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68RU8.1|YCF1_PANGI
           RecName: Full=Putative membrane protein ycf1
           gi|51235372|gb|AAT98568.1| ycf1 protein [Panax ginseng]
          Length = 1919

 Score = 47.4 bits (111), Expect(2) = 9e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%), Gaps = 1/30 (3%)
 Frame = +2

Query: 41  SMEVNKIHSLL-PDTDYHEFEQKIDRFDTK 127
           +ME+NKIH+LL PDTDY EF+QKID FD K
Sbjct: 592 TMEINKIHNLLLPDTDYQEFKQKIDPFDKK 621



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +3

Query: 138 LFTLISKLDRESGSSL 185
           LFTLISK DRES S L
Sbjct: 631 LFTLISKFDRESRSGL 646