BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022881
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                166   1e-39
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]           162   3e-38
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   162   3e-38
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  162   3e-38
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    162   3e-38

>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/140 (57%), Positives = 102/140 (72%)
 Frame = +2

Query: 2    LVIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDF 181
            LVIVDDFS+FTWV FLS K ET E+L K ++  + E  L ++ +RSDNGTEFKN  +++F
Sbjct: 950  LVIVDDFSRFTWVFFLSDKGETQEILKKFMRRAQNEFELKIKKVRSDNGTEFKNTGVEEF 1009

Query: 182  CSDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNR 361
              ++GI  ++S P TPQQNGVVERKNRTLIEAARTML E + P  FWAEAVNTAC+  NR
Sbjct: 1010 LGEEGIKHEFSVPYTPQQNGVVERKNRTLIEAARTMLDEYKTPDNFWAEAVNTACHAINR 1069

Query: 362  TLINKDLMKTPYEAIYKKRP 421
              ++K   KT YE +   +P
Sbjct: 1070 LYLHKIYKKTAYELLTGNKP 1089


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/142 (54%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   LVIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDF 181
           LVIVDDFS+FTWV FL  K ET   L + ++  + E  L V+ IRSDNG+EFKN  +++F
Sbjct: 207 LVIVDDFSRFTWVFFLQDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEF 266

Query: 182 CSDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNR 361
             ++GI  ++SAP TPQQNGVVERKNRTLI+ ARTML E + P YFW+EAVNTAC+  NR
Sbjct: 267 LEEEGIKHEFSAPYTPQQNGVVERKNRTLIDMARTMLGEFKTPEYFWSEAVNTACHAINR 326

Query: 362 TLINKDLMKTPYEAIYKKRPTL 427
             +++ L KT YE +   +P +
Sbjct: 327 VYLHRLLKKTSYELLTGNKPNV 348


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/141 (56%), Positives = 97/141 (68%)
 Frame = +2

Query: 5    VIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDFC 184
            VIVDDFS++TWVLFLS K E      K    ++ E    +  IRSD+G EF+N   +++C
Sbjct: 1119 VIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYC 1178

Query: 185  SDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNRT 364
            +  GI   +SAPRTPQQNGVVERKNRTL E ARTML+E+ LP YFWAEAVNT+CY  NR 
Sbjct: 1179 NKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLNRI 1238

Query: 365  LINKDLMKTPYEAIYKKRPTL 427
            L+   L KTPYE    K+P +
Sbjct: 1239 LLRPILKKTPYELWKNKKPNI 1259



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/140 (32%), Positives = 77/140 (55%)
 Frame = +2

Query: 2   LVIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDF 181
           +  VD F+ +TW+     K +   ++++ I +++ +    ++ +++D G EF    L   
Sbjct: 525 IAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFH--PLQSL 582

Query: 182 CSDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNR 361
              KGI  ++  P   QQNG VERK+R+++E   T+L++S+LP  FW  A +TA Y  NR
Sbjct: 583 LQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNR 642

Query: 362 TLINKDLMKTPYEAIYKKRP 421
                   KTPYE ++K  P
Sbjct: 643 LPTPVLHCKTPYELLFKSSP 662


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/142 (54%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   LVIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDF 181
           LVIVDD+S+FTWV FL  K +T E L   ++  + E  L ++ IRSDNGTEFKN+ ++ F
Sbjct: 205 LVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESF 264

Query: 182 CSDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNR 361
             ++GI  ++S+P TPQQNGVVERKNRTL++ ARTML E + P  FWAEAVNTACY  NR
Sbjct: 265 LEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINR 324

Query: 362 TLINKDLMKTPYEAIYKKRPTL 427
             +++ L KT YE +  K+P +
Sbjct: 325 LYLHRILKKTSYELLTGKKPNI 346


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/142 (54%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   LVIVDDFSKFTWVLFLSTKDETPEVLIKHIKVIEVELNLPVRAIRSDNGTEFKNATLDDF 181
           LVIVDD+S+FTWV FL  K +T E L   ++  + E  L ++ IRSDNGTEFKN+ ++ F
Sbjct: 205 LVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESF 264

Query: 182 CSDKGITRQYSAPRTPQQNGVVERKNRTLIEAARTMLSESRLPMYFWAEAVNTACYTQNR 361
             ++GI  ++S+P TPQQNGVVERKNRTL++ ARTML E + P  FWAEAVNTACY  NR
Sbjct: 265 LEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINR 324

Query: 362 TLINKDLMKTPYEAIYKKRPTL 427
             +++ L KT YE +  K+P +
Sbjct: 325 LYLHRILKKTSYELLTGKKPNI 346