BLASTX nr result
ID: Angelica22_contig00022535
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00022535 (1999 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 766 0.0 ref|NP_175971.3| transcription initiation factor TFIIH subunit H... 647 0.0 ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 642 0.0 ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|2... 632 e-178 ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 618 e-174 >ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 766 bits (1979), Expect = 0.0 Identities = 388/579 (67%), Positives = 458/579 (79%), Gaps = 2/579 (0%) Frame = +1 Query: 34 IVMQKRERFVFMPSDPGSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQD--KGESYIFE 207 ++ ++FVFMP+DP S + +VEFRFI GHKFSK NK ALLNLTQD KG YIFE Sbjct: 23 VLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLNLTQDSEKGGGYIFE 82 Query: 208 FDSFPDRDACRDFVAMAIAPPVNAGKAASDKSTVPPSSEQLSTAEMDRRIKLLQVDSELQ 387 F+++PDR+ CR+FV A+A A KA S++S V EQLST EM+RRIKLL+ DSELQ Sbjct: 83 FENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLREDSELQ 142 Query: 388 KLHKEFVMGGVLTEAEFWATRKKLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKY 567 KLHK+FV+ GVLTEAEFWATRKKLLD S SKQRVG KS MI ++KP +DG++NRV + Sbjct: 143 KLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTF 202 Query: 568 NLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVXXXXXXXXX 747 NLTPEIIHQIFAEKPAV +A+LN VP KMTE DFW KY RAEYLH T+N V Sbjct: 203 NLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAED 262 Query: 748 XXXXVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYD 927 VFLK DDILA+EARRKIRRVDPTLDMEAD+GDDY HLPDHG+ RD SK++ D QY+ Sbjct: 263 EELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQYE 322 Query: 928 LYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTRLKQVESANEASNTHMEQGRSD 1107 Y+R+ QDLNRHAAVVLEGR +DVEL DTR+VAEAL + K+VE+ANE S+ + + R + Sbjct: 323 QYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERLE 382 Query: 1108 LISRMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHE 1287 ISRM E+EDLQ PRD P A L IKDPRDYFDSQQANA+KT G++ +GS+ KC LS E Sbjct: 383 RISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQE 442 Query: 1288 AYGSLRKSISEIKGLGLTDPIVKAEVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNV 1467 AYGSLR ISEIK +GL+DPIVK ++A KV + LTQ IS++ +HLGK+P ESVLD LP + Sbjct: 443 AYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPII 502 Query: 1468 TKEEILHQWTSIQELLKHFWSSYPITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFR 1647 TKEE+LH WTSIQELL+HFWSSYPITTTYL+ K +++KDAMS+IY KLQEIK SVQ DFR Sbjct: 503 TKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFR 562 Query: 1648 HPVSLLVQPMTQALDAAFAHYEADFQKRSTKSAERPNGF 1764 H VSLLVQPM QALDAAFAHY+AD QKRS +S ERPNGF Sbjct: 563 HQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGF 601 >ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Short=AtTFB1-1; Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1| hypothetical protein [Arabidopsis thaliana] gi|332195172|gb|AEE33293.1| transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] Length = 591 Score = 647 bits (1669), Expect = 0.0 Identities = 334/568 (58%), Positives = 414/568 (72%) Frame = +1 Query: 61 VFMPSDPGSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESYIFEFDSFPDRDACR 240 +F+P+DP S KL V + I K++KE NK LNLT + +S+IFEF+++PD ACR Sbjct: 33 LFVPNDPKSDSKLKVLTQNIKSQKYTKEGSNKPPWLNLTNKQAKSHIFEFENYPDMHACR 92 Query: 241 DFVAMAIAPPVNAGKAASDKSTVPPSSEQLSTAEMDRRIKLLQVDSELQKLHKEFVMGGV 420 DF+ A+A + +KS V SSEQLS E++ R KLL+ +SELQ+LHK+FV V Sbjct: 93 DFITKALAKC----ELEPNKSVVSTSSEQLSIKELELRFKLLRENSELQRLHKQFVESKV 148 Query: 421 LTEAEFWATRKKLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKYNLTPEIIHQIF 600 LTE EFWATRKKLL + KSKQ++GLKS M+ +KPS+DG++NRV +NLTPEII QIF Sbjct: 149 LTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIF 208 Query: 601 AEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVXXXXXXXXXXXXXVFLKQDD 780 AEKPAVR+A++N VP KMTE DFW KY+RAEYL+STKN VFLK D+ Sbjct: 209 AEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDE 268 Query: 781 ILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYDLYKRSFLQDLN 960 ILA E R KIRRVDPTLDMEAD+GDDYTHL DHG+ RD + D+ + Q D +KRS LQDLN Sbjct: 269 ILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLN 328 Query: 961 RHAAVVLEGRSVDVELGDTRSVAEALTRLKQVESANEASNTHMEQGRSDLISRMAELEDL 1140 RHAAVVLEGRS+DVE DTR VAEALTR+KQV A+ + Q R + +SR+A +EDL Sbjct: 329 RHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDL 388 Query: 1141 QGPRDHPVAPLSIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHEAYGSLRKSISE 1320 Q P++ P+APLSIKDPRDYF+SQQ N + ++ R + HEAYG L++SI E Sbjct: 389 QAPQNFPLAPLSIKDPRDYFESQQGNVLNVPRGAKGLKR------NVHEAYGLLKESILE 442 Query: 1321 IKGLGLTDPIVKAEVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTS 1500 I+ GL+DP++K EV+F+VFS LT+ I+ + GK+P ES LD LP TK+E+LH WTS Sbjct: 443 IRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPRESFLDRLPKSTKDEVLHHWTS 502 Query: 1501 IQELLKHFWSSYPITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMT 1680 IQELLKHFWSSYPITTTYLH KV K+KDAMS Y KL+ +K SVQ D RH VSLLV+PM Sbjct: 503 IQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQ 562 Query: 1681 QALDAAFAHYEADFQKRSTKSAERPNGF 1764 QALDAAF HYE D Q+R+ KS ERPNG+ Sbjct: 563 QALDAAFHHYEVDLQRRTAKSGERPNGY 590 >ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata] Length = 592 Score = 642 bits (1655), Expect = 0.0 Identities = 334/569 (58%), Positives = 415/569 (72%), Gaps = 1/569 (0%) Frame = +1 Query: 61 VFMPSDPGSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESYIFEFDSFPDRDACR 240 +F+P+DP S KL V + I K +KE NK LNLT G+S+IFEF+++PD ACR Sbjct: 33 LFVPNDPKSDSKLKVLTQNIKSQKNTKEESNKPPWLNLTNKLGKSHIFEFENYPDMHACR 92 Query: 241 DFVAMAIAPPVNAGKAASDKSTVPPSSEQLSTAEMDRRIKLLQVDSELQKLHKEFVMGGV 420 DF+ A+A + +KS V SSEQLS E++ R KLL+ +SELQ+LHK+FV V Sbjct: 93 DFITKALAKC----EEEPNKSVVSTSSEQLSIKELELRFKLLRENSELQRLHKQFVESKV 148 Query: 421 LTEAEFWATRKKLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKYNLTPEIIHQIF 600 LTE EFWATRKKLL + KSKQ+VGLKS M+ +KPS+DG++NRV +NLTPEII QIF Sbjct: 149 LTEDEFWATRKKLLGKDSIRKSKQQVGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIF 208 Query: 601 AEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVXXXXXXXXXXXXXVFLKQDD 780 AEKPAVR+A++N VP KMTE DFW KY+RAEYL+STKN VFLK D+ Sbjct: 209 AEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDE 268 Query: 781 ILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYDLYKRSFLQDLN 960 ILA E R+KIRRVDPTLDMEAD+GDDYTHL DHG+ RD + D+ + Q D ++RS LQDLN Sbjct: 269 ILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFRRSLLQDLN 328 Query: 961 RHAAVVLEGRSVDVELGDTRSVAEALTRLKQVESANEASNTHMEQGRSDLISRMAELEDL 1140 RHAAVVLEGRS+DVE DTR VAEALTR+KQV A+ + R + +SR+A +EDL Sbjct: 329 RHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANLERLERMSRLAGMEDL 388 Query: 1141 QGPRDHPVAPLSIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHEAYGSLRKSISE 1320 Q P++ P+APLSIKDPRDYF+SQQ N + ++ R + HEAYG L++SI E Sbjct: 389 QAPQNFPLAPLSIKDPRDYFESQQGNVLNVPRGAKGLKR------NVHEAYGLLKESILE 442 Query: 1321 IKGLGLTDPIVKAEVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTS 1500 I+ GL+DP+++ EV+F+VFS LT+ IS + +GK+P ES LD LP TK+E+LH WTS Sbjct: 443 IRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTS 502 Query: 1501 IQELLKHFWSSYPITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMT 1680 IQELL+HFWSSYPITTTYLH KV K+KDAMS Y KL+ +K SVQ D RH VSLLV+PM Sbjct: 503 IQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQ 562 Query: 1681 QALDAAFAHYEADFQKRSTKS-AERPNGF 1764 QALDAAF HYEAD Q+R+ KS ERPNG+ Sbjct: 563 QALDAAFQHYEADLQRRTAKSGGERPNGY 591 >ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|222853415|gb|EEE90962.1| predicted protein [Populus trichocarpa] Length = 603 Score = 632 bits (1629), Expect = e-178 Identities = 334/577 (57%), Positives = 418/577 (72%), Gaps = 5/577 (0%) Frame = +1 Query: 52 ERFVFMPSDPGSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESYIFEFDSFPDRD 231 ER +F P+ P S KLN+EFRF+ HK++KE NK +LNLT +G SYIFEF+S+ D Sbjct: 30 ERLMFKPNSPNSATKLNMEFRFVKNHKYTKEGSNKAPMLNLTSSQGVSYIFEFESYDDLH 89 Query: 232 ACRDFVAMAIAPPVNAGKAASDKSTVPPSSEQLSTAEMDRRIKLLQVDSELQKLHKEFVM 411 C++ V A++ K D S VP SEQ ST E+ R+ +LQ +SELQ LHK FV Sbjct: 90 VCKECVGKALSKTGETPKPI-DTSEVP--SEQPSTEELLLRMNMLQENSELQNLHKRFVS 146 Query: 412 GGVLTEAEFWATRKKLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKYNLTPEIIH 591 G+LTEAEFWATRKKLL S KSKQR GLKS ++ + KPS+DG++N+V + LTPEI+ Sbjct: 147 DGILTEAEFWATRKKLLGGNFSKKSKQRTGLKSFVLSDTKPSTDGRTNKVTFTLTPEIVR 206 Query: 592 QIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNI---VXXXXXXXXXXXXXV 762 ++FAEKPAV RAYL+LVPKKM+E DFW KY RAEYL KN + Sbjct: 207 EVFAEKPAVHRAYLDLVPKKMSERDFWSKYCRAEYLQHAKNANAAAAAAAEAAEDEELAL 266 Query: 763 FLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYDLYKRS 942 FLK DDILASE RRKIR VDPTL+MEADEGDDYTHLPDHG+ RD SK++T+SQ++LY R+ Sbjct: 267 FLKPDDILASETRRKIRCVDPTLNMEADEGDDYTHLPDHGIVRDGSKEITESQHELYIRT 326 Query: 943 FLQDLNRHAAVVLEGRSVDVE-LGDTRSVAEALTRLKQVESA-NEASNTHMEQGRSDLIS 1116 Q+LNRHAAVVL+G +D E L DT++VAEAL + KQ ++A NE + + Q R IS Sbjct: 327 LSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQSKQGQNASNEETYMNANQDRLSRIS 386 Query: 1117 RMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHEAYG 1296 +M E++DLQ D P+APLSIKDPRDYFDSQQA A+K S ++ G+ K ILSA E+Y Sbjct: 387 KMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATALKNSRDTSIGTDPVKRILSAEESYA 446 Query: 1297 SLRKSISEIKGLGLTDPIVKAEVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKE 1476 SLR SIS IK GL DPI+K EVA KV S LT IS++ Y GK+ SVLD LPN KE Sbjct: 447 SLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISSTKYDTGKNHGLSVLDTLPNTIKE 506 Query: 1477 EILHQWTSIQELLKHFWSSYPITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPV 1656 E+L+ WTS+QELLKH+WSSYPITTTYL+ KV+++KDAMSKI +LQE+K SVQ D RH V Sbjct: 507 ELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAMSKIDSQLQELKESVQSDLRHQV 566 Query: 1657 SLLVQPMTQALDAAFAHYEADFQKRSTKSAERPNGFS 1767 +LL++PM QAL+AA HY+A+ QKRS +S +R NG++ Sbjct: 567 TLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGYT 603 >ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus communis] gi|223529828|gb|EEF31761.1| TFIIH basal transcription factor complex subunit, putative [Ricinus communis] Length = 597 Score = 618 bits (1593), Expect = e-174 Identities = 326/575 (56%), Positives = 423/575 (73%), Gaps = 3/575 (0%) Frame = +1 Query: 52 ERFVFMPSDPGSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESYIFEFDSFPDRD 231 E+ F P++P S KL+++F+++ HK +KE + KA+LNLT ++G SYIFEF++ D Sbjct: 30 EKLAFRPNNPNSASKLDMDFKYVTNHKNTKEG-SAKAMLNLTSNQGVSYIFEFENHDDLR 88 Query: 232 ACRDFVAMAIAPPVNAGKAASDKSTVPPSSEQLSTAEMDRRIKLLQVDSELQKLHKEFVM 411 C++ V A++ + K D VP S+Q ST E+ R+ LL+ + ELQKLHK+FV Sbjct: 89 ICKEIVGKALSKLGDTPKPP-DAPEVP--SDQPSTEELLLRMNLLRENLELQKLHKQFVS 145 Query: 412 GGVLTEAEFWATRKKLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKYNLTPEIIH 591 VLT++EFWATRKKLL+ + S KSKQRVGLKS M+ + KP DGQ+N+V +NLTPEI+ Sbjct: 146 DRVLTDSEFWATRKKLLNGEFSRKSKQRVGLKSVMLADSKPLIDGQTNKVTFNLTPEIVR 205 Query: 592 QIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVXXXXXXXXXXXXXVFLK 771 +IFAEKPAV +AYL+LVP KM+E DFW KY RAEYL ++NI +FLK Sbjct: 206 EIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRSRNIHAAAAEAAEDEELALFLK 265 Query: 772 QDDILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYDLYKRSFLQ 951 DDILASE R+KIR VDPTLDMEAD+GDDYTHLPDHG+ RD SKD+ +SQ++ Y+R+ LQ Sbjct: 266 PDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIVRDGSKDVIESQHEPYRRTLLQ 325 Query: 952 DLNRHAAVVLEGRSVDVE-LGDTRSVAEALTRLKQ-VESANEASNTHMEQGRSDLISRMA 1125 DLNRHAAVVLEG ++D E L DT++VA+AL R K+ +++ N ++ + Q RS+ IS+M Sbjct: 326 DLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKRGIKTINREADGNANQERSNRISQMM 385 Query: 1126 ELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHEAYGSLR 1305 E+EDLQG DH +APL IKDPRDYFDSQQA+A+K S + SG+ +C LS+ EAY SLR Sbjct: 386 EIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALKNSRDIPSGTEAARCSLSSQEAYASLR 445 Query: 1306 KSISEIKGLGLTDPIVKAEVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEIL 1485 SI++ K +GL DPIVK E+A KV S LT IS++ YHLGK+ ESVLD LPN KEE+L Sbjct: 446 DSITQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLGKNSRESVLDRLPNTIKEELL 505 Query: 1486 HQWTSIQELLKHFWSSYPITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFR-HPVSL 1662 H W SI+ELL+H+WSSYPITT YL+ KV+++KDAMSKI +LQE+K SVQ D H SL Sbjct: 506 HHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDAMSKIDSQLQEMKESVQSDLXFHATSL 565 Query: 1663 LVQPMTQALDAAFAHYEADFQKRSTKSAERPNGFS 1767 + P AL+AA HY+AD QKRS KSAERPNG++ Sbjct: 566 GIVP---ALEAAMQHYDADLQKRSAKSAERPNGYA 597