BLASTX nr result

ID: Angelica22_contig00022489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022489
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   138   4e-31
emb|CAJ65876.1| putative integrase [Cucumis melo]                     136   2e-30
emb|CAJ65870.1| putative integrase [Cucumis melo]                     136   2e-30
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   135   3e-30
emb|CAJ65872.1| putative integrase [Cucumis melo]                     135   3e-30

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/98 (68%), Positives = 80/98 (81%)
 Frame = +2

Query: 5    IWEDISLDFVEGLPQSQGIDTLLVVVDRLSKYTHFIGIKHPYTTHLVATHLVATVFVKEI 184
            IWEDIS+DFVEGLP+SQG DT+LVVVDRLSKY HFI +KHP+T        VA VF+KEI
Sbjct: 1174 IWEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFT-----APTVAAVFIKEI 1228

Query: 185  VRHHGIPATIVSDRDRVFLSIFWRELFHTQGTKLQRSS 298
            V+ HG P+TIVSDRD+VF+S+FW+ELF  QGT L RS+
Sbjct: 1229 VKLHGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRST 1266


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/99 (67%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   RIWEDISLDFVEGLPQSQGIDTLLVVVDRLSKYTHFIGIKHPYTTHLVATHLVATVFVKE 181
           RIWEDIS+DFVEGLP+S+G DT+LVVVDRLSKY HFI + HP+     +  +VA VFVKE
Sbjct: 38  RIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPF-----SAKVVALVFVKE 92

Query: 182 IVRHHGIPATIVSDRDRVFLSIFWRELFHTQGTKLQRSS 298
           +VR HG P +IVSDRDRVFLS FW+ELF  QGT+L+RS+
Sbjct: 93  VVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQLKRST 131


>emb|CAJ65870.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/99 (66%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   RIWEDISLDFVEGLPQSQGIDTLLVVVDRLSKYTHFIGIKHPYTTHLVATHLVATVFVKE 181
           RIWEDIS+DFVEGLP+S+G DT+LVVVDRLSKY HFI + HP+     +  +VA VF+KE
Sbjct: 38  RIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPF-----SAKVVALVFIKE 92

Query: 182 IVRHHGIPATIVSDRDRVFLSIFWRELFHTQGTKLQRSS 298
           +VR HG P +IVSDRDRVFLS FW+ELF  QGT+L+RS+
Sbjct: 93  VVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQLKRST 131


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/98 (62%), Positives = 81/98 (82%)
 Frame = +2

Query: 5    IWEDISLDFVEGLPQSQGIDTLLVVVDRLSKYTHFIGIKHPYTTHLVATHLVATVFVKEI 184
            +WEDIS+DF+EGLP S+G+DT+LV+VDRLSKY HF+ ++HP+T       +VA +FVKE+
Sbjct: 1241 VWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFT-----ALMVADLFVKEV 1295

Query: 185  VRHHGIPATIVSDRDRVFLSIFWRELFHTQGTKLQRSS 298
            VR HG P++IVSDRDR+FLS+FW+ELF   GT L+RSS
Sbjct: 1296 VRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSS 1333


>emb|CAJ65872.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/99 (65%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   RIWEDISLDFVEGLPQSQGIDTLLVVVDRLSKYTHFIGIKHPYTTHLVATHLVATVFVKE 181
           RIWEDIS+DFVEGLP+S+G DT+LV+VDRLSKY HFI + HP+     +  +VA VF+KE
Sbjct: 38  RIWEDISMDFVEGLPRSKGFDTILVIVDRLSKYAHFITLGHPF-----SAKVVALVFIKE 92

Query: 182 IVRHHGIPATIVSDRDRVFLSIFWRELFHTQGTKLQRSS 298
           +VR HG P +IVSDRDRVFLS FW+ELF  QGT+L+RS+
Sbjct: 93  VVRLHGYPRSIVSDRDRVFLSHFWQELFRLQGTQLKRST 131


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