BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022487
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26363.3| unnamed protein product [Vitis vinifera]              261   2e-67
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   256   8e-66
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   255   1e-65
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai...   255   1e-65
ref|NP_193202.2| DNA-directed RNA polymerase II subunit G [Arabi...   251   1e-64

>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  261 bits (667), Expect = 2e-67
 Identities = 121/179 (67%), Positives = 153/179 (85%)
 Frame = +3

Query: 81  WVTKMFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLD 260
           W T+MFLK QL WNVIIPAE LDAKGL LQ++II+RLLD F+ KKAT  LGYFL VT+L+
Sbjct: 62  WKTEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLE 121

Query: 261 KVGEGRVRQHSGDVLFPVTFTCMTYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHL 440
            +GEG+VRQHSGDVLFPV F+C+T+K F GEIL+G VHK+LKHGV LRCGPVE+IYLS  
Sbjct: 122 NIGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQ 181

Query: 441 KMQDYSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEKEFQAVANLDGDFLGPI 617
           KM DY +VPGENP+F++EK +KIEK V +R +V+G +++EAE+EFQA+ +L+GD+LGP+
Sbjct: 182 KMPDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPL 240


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  256 bits (653), Expect = 8e-66
 Identities = 121/175 (69%), Positives = 153/175 (87%)
 Frame = +3

Query: 93  MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGE 272
           MFLK QL WNVIIPAENLDAKGL LQ++II+RLLDEFA KKAT  LGYFL VT+L+ +GE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 273 GRVRQHSGDVLFPVTFTCMTYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQD 452
           G+VRQ +GDVLFPV F+ +T+K + GEILEG VHK+LKHGVFLRCGPVE+IYLS+LKM D
Sbjct: 61  GKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 453 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEKEFQAVANLDGDFLGPI 617
           Y +VPGENP+F+++K +KIEK V +R +VIG +++EAE+EFQA+ +L+GD+LGP+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPV 174


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  255 bits (652), Expect = 1e-65
 Identities = 119/175 (68%), Positives = 150/175 (85%)
 Frame = +3

Query: 93  MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGE 272
           MFLK QL WNVIIPAE LDAKGL LQ++II+RLLD F+ KKAT  LGYFL VT+L+ +GE
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 273 GRVRQHSGDVLFPVTFTCMTYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQD 452
           G+VRQHSGDVLFPV F+C+T+K F GEIL+G VHK+LKHGV LRCGPVE+IYLS  KM D
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 453 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEKEFQAVANLDGDFLGPI 617
           Y +VPGENP+F++EK +KIEK V +R +V+G +++EAE+EFQA+ +L+GD+LGP+
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPL 175


>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 178

 Score =  255 bits (651), Expect = 1e-65
 Identities = 113/175 (64%), Positives = 154/175 (88%)
 Frame = +3

Query: 93  MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGE 272
           MFLK QL WNV+IPAEN+DAKGL L++AI+V LLD FA+KKAT  LGY++ VT+LDK+GE
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYVAVTTLDKIGE 60

Query: 273 GRVRQHSGDVLFPVTFTCMTYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQD 452
           G++R+H+G+VLFPV F+ MT+K F GEI+ G VHK+LKHGVF+RCGP+E++YLS+ KM D
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 453 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEKEFQAVANLDGDFLGPI 617
           Y +VPGENPIFM+EK+++I+    +RV+VIG+++MEAE+EFQA+A+L+GD+LGP+
Sbjct: 121 YKYVPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEAEREFQALASLEGDYLGPL 175


>ref|NP_193202.2| DNA-directed RNA polymerase II subunit G [Arabidopsis thaliana]
           gi|149944323|gb|ABR46204.1| At4g14660 [Arabidopsis
           thaliana] gi|332658072|gb|AEE83472.1| DNA-directed RNA
           polymerase II subunit G [Arabidopsis thaliana]
          Length = 178

 Score =  251 bits (642), Expect = 1e-64
 Identities = 110/175 (62%), Positives = 153/175 (87%)
 Frame = +3

Query: 93  MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFAAKKATSALGYFLVVTSLDKVGE 272
           MFLK QL WNV+IPAEN+DAKGL L++AI+V LL+ FA+KKAT  LGY++ VT+LDK+GE
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60

Query: 273 GRVRQHSGDVLFPVTFTCMTYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQD 452
           G++R+H+G+VLFPV F+ MT+K F GEI+ G VHK+LKHGVF+RCGP+E++YLS+ KM D
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 453 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEKEFQAVANLDGDFLGPI 617
           Y ++PGENPIFM+EK+++I+    +RV+VIG+++ME E+EFQA+A+L+GD+LGP+
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEVEREFQALASLEGDYLGPL 175