BLASTX nr result

ID: Angelica22_contig00022484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022484
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    73   3e-11
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    64   1e-08
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...    63   2e-08
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...    63   2e-08

>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
 Frame = +3

Query: 111 ELTLCKTILKEYADKINAEKPNYNTEKGDGL--GFTSSLTFNGKQYVGNEGRNKKVSQHL 284
           +   CK+IL E+A K+N EKP YNT +  GL   F S+L F+G  Y G+ GRNKK ++ L
Sbjct: 221 DTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTGDAGRNKKEAEQL 280

Query: 285 AARAVILSI 311
           AARAVILS+
Sbjct: 281 AARAVILSL 289


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +3

Query: 111 ELTLCKTILKEYADKINAEKPNYNTEKGDGL--GFTSSLTFNGKQYVGNEGRNKKVSQHL 284
           +   CK+IL E+A K+N EKP Y T + +GL   F SSL FNG  Y G+ GRNKK ++ L
Sbjct: 104 DTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKEAEQL 163

Query: 285 AARAVILSI 311
           AAR VILSI
Sbjct: 164 AARTVILSI 172


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = +3

Query: 123 CKTILKEYADKINAEKPNYNTEKGDGLG--FTSSLTFNGKQYVGNEGRNKKVSQHLAARA 296
           CK+IL EYA K+  E P YNT K  GL   F SS  FNG  Y G+ GR KK ++ LAARA
Sbjct: 101 CKSILNEYAVKMQLEMPTYNTVKQGGLFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAARA 160

Query: 297 VILSI 311
            +LS+
Sbjct: 161 AVLSL 165


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = +3

Query: 111 ELTLCKTILKEYADKINAEKPNYNTEKGDG--LGFTSSLTFNGKQYVGNEGRNKKVSQHL 284
           +L LCK+IL EY DK+  E+P Y T+   G    F S+L F+G  Y  + GR KK ++ L
Sbjct: 159 DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQL 218

Query: 285 AARAVILSI 311
           AARA ILS+
Sbjct: 219 AARAAILSL 227


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = +3

Query: 111 ELTLCKTILKEYADKINAEKPNYNTEKGDG--LGFTSSLTFNGKQYVGNEGRNKKVSQHL 284
           +L LCK+IL EY DK+  E+P Y T+   G    F S+L F+G  Y  + GR KK ++ L
Sbjct: 159 DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQL 218

Query: 285 AARAVILSI 311
           AARA ILS+
Sbjct: 219 AARAAILSL 227


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