BLASTX nr result

ID: Angelica22_contig00022459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022459
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...    64   2e-08
ref|XP_002311220.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...    60   2e-07
gb|AFK34889.1| unknown [Medicago truncatula]                           60   2e-07

>ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 4   LYKAAQSSAVAFKKWRMGGPRFEKASVLGRKRKPIE 111
           LY+AAQSS  AFKKWRMGGPR ++AS+LGRKRKP E
Sbjct: 149 LYEAAQSSMAAFKKWRMGGPRLQRASILGRKRKPAE 184


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 4   LYKAAQSSAVAFKKWRMGGPRFEKASVLGRKRKPIE 111
           LY+ AQSS  AFKKWRMGGPRF++ASVLGRKRKP +
Sbjct: 151 LYETAQSSMAAFKKWRMGGPRFQRASVLGRKRKPTD 186


>ref|XP_002311220.1| predicted protein [Populus trichocarpa] gi|222851040|gb|EEE88587.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 4   LYKAAQSSAVAFKKWRMGGPRFEKASVLGRKRKPIE 111
           +Y+AAQSS  AFKKWRMGGPR ++AS+LGRKRKP E
Sbjct: 149 MYEAAQSSMAAFKKWRMGGPRLQRASILGRKRKPAE 184


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   KLYKAAQSSAVAFKKWRMGGPRFEKASVLGRKRKPIE 111
           K+Y+AAQSS  AFKKWRMGGPRF++AS L RKRK  E
Sbjct: 153 KMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 189


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 4   LYKAAQSSAVAFKKWRMGGPRFEKASVLGRKRKPIE 111
           LY+ AQS+  +FKKWRMGGPRF+ AS+LGRKRKP E
Sbjct: 151 LYETAQSAMASFKKWRMGGPRFQIASILGRKRKPTE 186


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