BLASTX nr result

ID: Angelica22_contig00022348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022348
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    87   3e-15
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    82   1e-13
ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncat...    78   1e-12

>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/136 (36%), Positives = 75/136 (55%)
 Frame = -1

Query: 410 LSKMPPIRKNPTLSDDLISEILVRVPVKSLLRFQSVCKTWLSLIKHPAFVRSQLRHATET 231
           L ++PP+   PTL  D+I EI+ R+PVK +LRFQ VCK+W SLI  P FV+ QL     T
Sbjct: 20  LHELPPL---PTLPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQL--CVST 74

Query: 230 DQTLIISRYKKPDEENRFLLFHIDSRETEVDLKYPYSRDEFKYVPFSTLVGSANGIVCVA 51
            + L    Y     +     + +DS  T  D+   +++ ++ Y  F   +GS NGIVC+A
Sbjct: 75  TRNLHFLNYAYDSRKYILTSYPLDSDFT--DINSNFTQSDWPYAKFYRFIGSCNGIVCIA 132

Query: 50  VDFINFKVSIYLWNPA 3
            +   +   +  WNP+
Sbjct: 133 DN--EYTSLVICWNPS 146


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
 Frame = -1

Query: 374 LSDDLISEILVRVPVKSLLRFQSVCKTWLSLIKHPAFVRSQLRHA-TETD-QTLIISRYK 201
           LS+DLI EIL ++P+KSLLR  S+CK+W SLIK P F+   L+H  + TD Q L + R  
Sbjct: 5   LSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDRQNLFLLRLC 64

Query: 200 KPDEENRFLLFHIDSRE--TEVDLKYPYSRDEFKYVPFSTLVGSANGIVCVAVDFINFKV 27
             + E ++ L  +D+++    + L +P+   E     +  ++GS+NG++C+A  F +  V
Sbjct: 65  SREREEQYSL-RLDNQDFNEHMQLHFPFKSSE----SYFHVIGSSNGLICLANIFQSLIV 119

Query: 26  SIYLWNP 6
           S  LWNP
Sbjct: 120 SFILWNP 126


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = -1

Query: 389 RKNPTLSDDLISEILVRVPVKSLLRFQSVCKTWLSLIKHPAFVRSQLRHATETDQTLIIS 210
           +K P L  ++ISEIL R+PVK L+RF+ V KTW SLI HP FV++ L+   E        
Sbjct: 3   KKIPKLPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYK 62

Query: 209 RYKKPDEE---NRFLLFHIDSRETEVDLKYPYSRDEFKYVPFSTLVGSANGIVCVAVDFI 39
            +   D     +    F  D       LK+P S  E+ Y+    ++GS NG+VC     I
Sbjct: 63  IFLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYI---EILGSCNGLVC---GLI 116

Query: 38  NFKVSIYLWNPA 3
           +    IY+WNP+
Sbjct: 117 HDNPLIYIWNPS 128


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/126 (36%), Positives = 69/126 (54%)
 Frame = -1

Query: 380 PTLSDDLISEILVRVPVKSLLRFQSVCKTWLSLIKHPAFVRSQLRHATETDQTLIISRYK 201
           PTL  D+I EI+ R+PVK +LRF+ VCK+W SLI  P FV+ QL     T + L    Y 
Sbjct: 27  PTLPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQL--CVSTTRNLHFRNYA 84

Query: 200 KPDEENRFLLFHIDSRETEVDLKYPYSRDEFKYVPFSTLVGSANGIVCVAVDFINFKVSI 21
               +     + +DS  T  D+   +++ ++ Y  F   +GS NGIVC+A +   +   +
Sbjct: 85  YDSRKYILTSYPLDSDFT--DITSNFTQSDWPYAKFYRFIGSCNGIVCLADN--EYTSLV 140

Query: 20  YLWNPA 3
             WNP+
Sbjct: 141 ICWNPS 146


>ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487489|gb|AES68692.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 413

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
 Frame = -1

Query: 392 IRKNPTLSDDLISEILVRVPVKSLLRFQSVCKTWLSLIKHPAFVRSQLRHATET------ 231
           +R + TL  D+I EIL R+PVK +L+F+ VCK+W SLI  P FV+ QL  +T        
Sbjct: 38  LRVSTTLPSDVIPEILCRLPVKFILQFRCVCKSWNSLISDPKFVKKQLNVSTARNIHFLL 97

Query: 230 -DQTLIISRYKKPDEENRFLLFHIDSRETEVDLKYPYSRDEFKYVPFSTLVGSANGIVCV 54
            D T  + +Y    E    +  +I S  T  +        ++        VGS NGI+C+
Sbjct: 98  YDHTRYLGKYILLSEPIDSIFTNITSNSTRFEYSPNGFNGDYPRSILHDFVGSCNGILCI 157

Query: 53  AVDFINFKVSIYLWNPA 3
           A D   +K  + LWNP+
Sbjct: 158 ADD---YKGLVILWNPS 171


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