BLASTX nr result

ID: Angelica22_contig00022188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022188
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003623994.1| F-box protein [Medicago truncatula] gi|35549...    59   4e-07
ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|35549...    57   1e-06
ref|XP_002318419.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003623924.1| F-box protein [Medicago truncatula] gi|35549...    56   3e-06

>ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|222853856|gb|EEE91403.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = +3

Query: 54  AADLPDEILHREVLTRLPIKSAVRFKSVSKSWLSLFSNPQFVKQHHTYNTTQNPN 218
           +A++P +I+  ++LTRLP+KS  RFKSVSKS L+   NP+FVKQH      +NPN
Sbjct: 18  SANIPSDIIS-DILTRLPVKSLTRFKSVSKSMLAFLGNPEFVKQHLKRANLKNPN 71


>ref|XP_003623994.1| F-box protein [Medicago truncatula] gi|355499009|gb|AES80212.1|
           F-box protein [Medicago truncatula]
          Length = 249

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +3

Query: 51  TAADLPDEILHREVLTRLPIKSAVRFKSVSKSWLSLFSNPQFVKQHHTYNTTQNP 215
           T   LPD+++  E+L+ LP+KS VRFK V KSW +L SNP FVK H   ++T+NP
Sbjct: 2   TPVVLPDDLI-TELLSFLPVKSPVRFKCVCKSWKTLISNPNFVKLHLNQSSTRNP 55


>ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|355499008|gb|AES80211.1|
           F-box protein [Medicago truncatula]
          Length = 445

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +3

Query: 51  TAADLPDEILHREVLTRLPIKSAVRFKSVSKSWLSLFSNPQFVKQHHTYNTTQNP 215
           T   LPD+++  E+L+ LP+KS VR K VSKSW SL S+P FVK H   ++T+NP
Sbjct: 5   TPVVLPDDLI-AELLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHLNRSSTRNP 58


>ref|XP_002318419.1| predicted protein [Populus trichocarpa] gi|222859092|gb|EEE96639.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  LPDEILHREVLTRLPIKSAVRFKSVSKSWLSLFSNPQFVKQH-HTYNTTQN 212
           LP+EI+  E+LTRLP+KS +RFK VSK W SL ++P+F+  H H Y+T ++
Sbjct: 14  LPEEII-TEILTRLPVKSLLRFKLVSKDWYSLITSPEFIPAHLHKYSTQKS 63


>ref|XP_003623924.1| F-box protein [Medicago truncatula] gi|355498939|gb|AES80142.1|
           F-box protein [Medicago truncatula]
          Length = 431

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 63  LPDEILHREVLTRLPIKSAVRFKSVSKSWLSLFSNPQFVKQHHTYNTTQNPN 218
           LPD+++  EVL+ LP+   +RF+SVSKSW +L SNP FVK H   + TQNP+
Sbjct: 16  LPDDLI-AEVLSFLPVIFLLRFRSVSKSWKTLISNPAFVKLHLKRSATQNPH 66


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