BLASTX nr result

ID: Angelica22_contig00022169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022169
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...   315   8e-84
ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...   315   1e-83
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              306   4e-81
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,...   306   4e-81
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79

>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score =  315 bits (808), Expect = 8e-84
 Identities = 183/338 (54%), Positives = 217/338 (64%), Gaps = 5/338 (1%)
 Frame = +3

Query: 3    RDEWEKYLRSKVELQSLPKHDRKKKPKEYQGIGVLDGTIRKTSGDNTDVSSISKQXXXXX 182
            R+EWEKYL SKVELQ L    +K K KE +G G+L+G +  TSG NT+ +SISK      
Sbjct: 448  REEWEKYLLSKVELQGLQTR-KKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDAL 506

Query: 183  XXXXXXXRKEVKKDDRTNSEIFEDKAEHQKGKKRRASRNIPTTSNVDDKNSDDATVNKRS 362
                       KKD   +           +GK R   RNI  T               + 
Sbjct: 507  MAAASVISL-AKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQ-------VSGHKV 558

Query: 363  DKHPSESHKRIDPEVIGGVHTSIDEGISAGKGIIRKHVQGVD----TEGTMLPPVHFYAI 530
            +   SE  +    EV G       E  S GK I  KH Q  D    +    LP VHFYA+
Sbjct: 559  NNSNSEQGRNDKSEVFGS------ENDSQGKEIDPKHCQETDAPSFSNAKQLPLVHFYAL 612

Query: 531  ESD-THILDILKPSVIIVYHPDVVFVREIEIYKSENPSSKLKVYFLFYDDSTEVQKFEAS 707
            ES+ ++ILD+LKPS++IVYHPD+ FVREIEIYK+ENPS KLKVYFLFY+DSTEVQKFEAS
Sbjct: 613  ESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLKVYFLFYEDSTEVQKFEAS 672

Query: 708  IRRENAAFESLIRQKSMMMLPAYQEGCFSGFEPPMEPASVIPQNSITRKAGGRKTIEKEM 887
            IRREN AFESLIRQKS+MM+P  Q+    G    +EP ++  QNSITRKAGGRK +EKE+
Sbjct: 673  IRRENGAFESLIRQKSLMMIPVDQDVRGLGLNSSIEPQAITSQNSITRKAGGRKEVEKEI 732

Query: 888  QVIVDMREFMSNLPNVLHQKGMRIVPVTLEVGDYILSP 1001
            QVIVDMREFMS+LPNVLHQKGMRI+PVTLEVGDYILSP
Sbjct: 733  QVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSP 770


>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
            gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
            [Medicago truncatula]
          Length = 984

 Score =  315 bits (806), Expect = 1e-83
 Identities = 175/346 (50%), Positives = 222/346 (64%), Gaps = 13/346 (3%)
 Frame = +3

Query: 3    RDEWEKYLRSKVELQSLPKHDRKKKPKEYQGIGVLDGTIRKTSGDNTDVSSISKQXXXXX 182
            +DEW+KYL +KV+L+ +    +KKKPK+ +G G+L+G    +   NT+   I+KQ     
Sbjct: 451  QDEWKKYLLNKVQLRDVVH--KKKKPKDPKGFGILNGVTPISLAQNTETGGINKQEHDAL 508

Query: 183  XXXXXXXRKEVKKDDRTNSEIFEDKAEHQKGKKRR--ASRNIPTT---SNVDDKNSDDAT 347
                   R   +K+         D   H +GK +R   +RN P     S V   N ++ T
Sbjct: 509  LAAASKLRNLAEKNHVVEDTPQSDLGGHVRGKGKRKLGNRNGPIIIDGSGVQSNNKEEVT 568

Query: 348  VNK------RSDKHPSESHKRIDPEVIGGVHTSIDEGISAGKGIIRKHV--QGVDTEGTM 503
              K      ++  H  E+       V    H     GIS    ++R+H     +  +G  
Sbjct: 569  SGKTGMSDSKNKAHMGETSAVSTDRVCETKHG----GISVDDAVLRRHTFPDAMARDGKP 624

Query: 504  LPPVHFYAIESDTHILDILKPSVIIVYHPDVVFVREIEIYKSENPSSKLKVYFLFYDDST 683
            LPPVHFYA+ESD  ILDILKPS+I+VYHPD+ FVREIE+YK+ENPS +LKVYF+FY+DST
Sbjct: 625  LPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDST 684

Query: 684  EVQKFEASIRRENAAFESLIRQKSMMMLPAYQEGCFSGFEPPMEPASVIPQNSITRKAGG 863
            EVQKFEASIRREN AFESLIRQKSMMM+P  Q G   GF   ++      QNSITRKAGG
Sbjct: 685  EVQKFEASIRRENGAFESLIRQKSMMMIPIDQSGHGLGFNSTLDSDLNTTQNSITRKAGG 744

Query: 864  RKTIEKEMQVIVDMREFMSNLPNVLHQKGMRIVPVTLEVGDYILSP 1001
            RK ++KEMQ+IVDMREFMS+LPN+LHQKGMRI+PVTLEVGDYILSP
Sbjct: 745  RKEVDKEMQIIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSP 790


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  306 bits (785), Expect = 4e-81
 Identities = 179/335 (53%), Positives = 213/335 (63%), Gaps = 2/335 (0%)
 Frame = +3

Query: 3    RDEWEKYLRSKVELQSLPKHDRKKKPKEYQGIGVLDGTIRKTSGDNTDVSSISKQXXXXX 182
            R+EWEKYL SKVELQ L    +K K KE +G G+L+G +  TSG NT+ +SISK      
Sbjct: 682  REEWEKYLLSKVELQGLQTR-KKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDAL 740

Query: 183  XXXXXXXRKEVKKDDRTNSEIFEDKAEHQKGKKRRASRNIPTTSNVDDKNSDDATVNKRS 362
                       KKD   +           +GK R   RNI  T               + 
Sbjct: 741  MAAASVISL-AKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQ-------VSGHKV 792

Query: 363  DKHPSESHKRIDPEVIGGVHTSIDEGISAGKGIIRKHVQGVD-TEGTMLPPVHFYAIESD 539
            +   SE  +    EV G       E  S GK I          +    LP VHFYA+ES+
Sbjct: 793  NNSNSEQGRNDKSEVFGS------ENDSQGKEIDPVKTDAPSFSNAKQLPLVHFYALESE 846

Query: 540  -THILDILKPSVIIVYHPDVVFVREIEIYKSENPSSKLKVYFLFYDDSTEVQKFEASIRR 716
             ++ILD+LKPS++IVYHPD+ FVREIEIYK+ENPS KLKVYFLFY+DSTEVQKFEASIRR
Sbjct: 847  KSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLKVYFLFYEDSTEVQKFEASIRR 906

Query: 717  ENAAFESLIRQKSMMMLPAYQEGCFSGFEPPMEPASVIPQNSITRKAGGRKTIEKEMQVI 896
            EN AFESLIRQKS+MM+P  Q+    G    +EP ++  QNSITRKAGGRK +EKE+QVI
Sbjct: 907  ENGAFESLIRQKSLMMIPVDQDVRGLGLNSSIEPQAITSQNSITRKAGGRKEVEKEIQVI 966

Query: 897  VDMREFMSNLPNVLHQKGMRIVPVTLEVGDYILSP 1001
            VDMREFMS+LPNVLHQKGMRI+PVTLEVGDYILSP
Sbjct: 967  VDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSP 1001


>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
            communis] gi|223529184|gb|EEF31160.1| DNA repair
            endonuclease xp-f / mei-9 / rad1, putative [Ricinus
            communis]
          Length = 887

 Score =  306 bits (785), Expect = 4e-81
 Identities = 179/348 (51%), Positives = 218/348 (62%), Gaps = 15/348 (4%)
 Frame = +3

Query: 3    RDEWEKYLRSKVELQSLPKHDRKK-KPKEYQGIGVLDGTIRKTSGDNTDVSSISKQXXXX 179
            R+EWEKYL SKVEL S+P   +KK KPKE +G G+LDG +   +  N + SSI+KQ    
Sbjct: 377  REEWEKYLLSKVELHSMPTPQKKKPKPKESKGFGILDGVVPVIAAQNAEASSINKQENDA 436

Query: 180  XXXXXXXXRKEVKKDDRTNSEIFEDKAEHQ-----------KGKKRRASRNIPTTSNVDD 326
                    R + +KD      I ED+ +             KG+ +R   N P  S  D+
Sbjct: 437  LLAAVSEIRNQHRKD-----YIVEDEPQPLVDGGKSCKTWGKGRNKRGRAN-PQNSGEDN 490

Query: 327  KNSDDATVNKRSDKHPSESHKRIDPEVIGGVHTSIDEGISAGKGIIRKHVQGVD---TEG 497
             NS+                     ++ G    S     S  +G++R+H Q +D   +  
Sbjct: 491  VNSE--------------------LKISGYSRAS-----SIEQGVLRRHTQQLDPLQSNA 525

Query: 498  TMLPPVHFYAIESDTHILDILKPSVIIVYHPDVVFVREIEIYKSENPSSKLKVYFLFYDD 677
              +P VHFYA ESD  ILDILKPSVIIVYHPD+ FVREIE+YK+ENPS +L+VYFLFY+D
Sbjct: 526  KQIPSVHFYAQESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENPSKRLRVYFLFYED 585

Query: 678  STEVQKFEASIRRENAAFESLIRQKSMMMLPAYQEGCFSGFEPPMEPASVIPQNSITRKA 857
            STEVQKFEA IRREN AFESLIRQKSMMM+P  Q     G    ++       N+ITRKA
Sbjct: 586  STEVQKFEAGIRRENGAFESLIRQKSMMMIPVDQNMNCLGLNSSVDSQPSSSLNAITRKA 645

Query: 858  GGRKTIEKEMQVIVDMREFMSNLPNVLHQKGMRIVPVTLEVGDYILSP 1001
            GGRK +EKEMQVIVDMREFMS+LPNVLHQKGMRI+PVTLEVGDYILSP
Sbjct: 646  GGRKEVEKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSP 693


>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
            predicted protein [Populus trichocarpa]
          Length = 982

 Score =  300 bits (769), Expect = 3e-79
 Identities = 173/350 (49%), Positives = 224/350 (64%), Gaps = 17/350 (4%)
 Frame = +3

Query: 3    RDEWEKYLRSKVELQSLPKHDRKK---KPKEYQGIGVLDGTIRKTSGDNTDVSSISKQXX 173
            ++EW+KYL SKVEL  LP  ++KK   KPKE +G G+LDG +  T+  + + SS +KQ  
Sbjct: 452  QEEWKKYLLSKVELGGLPAPEKKKAKLKPKEPKGFGILDGVVPVTTVQSAEASSTNKQEH 511

Query: 174  XXXXXXXXXXRKEVKKDDRTNSEI-----FEDKAEHQKGK--KRRASRNIPTTSNVDDKN 332
                      R + K+      E+        K   +KGK  K+R       + + D+ +
Sbjct: 512  DVLLVAASKIRNQYKRGLVVEDELQPLADSSKKGAKEKGKEHKKRGQATGQDSGSKDNDS 571

Query: 333  SDDATVNKRSDKHPSESHKRI---DPEVIGGVHTSIDEGISAGKGIIRKHVQGVDTEGTM 503
            + D  +    +   S++  +    D   I G + +  +  S  KG +++H + +   G+ 
Sbjct: 572  NIDTVIKDLPEISGSKNKSQTVENDQAAIDGYYEANLQRASVNKGALQRHAEELGLTGSR 631

Query: 504  ----LPPVHFYAIESDTHILDILKPSVIIVYHPDVVFVREIEIYKSENPSSKLKVYFLFY 671
                +PPVHF+A+ESD  ILDILKPSV+IVYHPD++FVREIE+YK+ENPS KLKVYF+FY
Sbjct: 632  NAKPIPPVHFHALESDQPILDILKPSVVIVYHPDMMFVREIEVYKAENPSKKLKVYFIFY 691

Query: 672  DDSTEVQKFEASIRRENAAFESLIRQKSMMMLPAYQEGCFSGFEPPMEPASVIPQNSITR 851
            +DSTEVQKFEASIRREN AFESLIRQKS+MM+P  Q            P     QNS TR
Sbjct: 692  EDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ------------PLGSSYQNS-TR 738

Query: 852  KAGGRKTIEKEMQVIVDMREFMSNLPNVLHQKGMRIVPVTLEVGDYILSP 1001
            +AGGRK IEKEMQVIVDMREFMS+LPNVLHQKGM I+PVTLEVGDYILSP
Sbjct: 739  RAGGRKEIEKEMQVIVDMREFMSSLPNVLHQKGMSIIPVTLEVGDYILSP 788


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