BLASTX nr result

ID: Angelica22_contig00022009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022009
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camell...    74   9e-12
ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|A...    68   7e-10
gb|AAO24774.1| GCPE protein [Catharanthus roseus]                      66   3e-09
gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synt...    66   3e-09
gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate sy...    63   2e-08

>gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
          Length = 741

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +2

Query: 89  MATGAVPTTFMSLKSKGHGLGFTRNVEFVKVSELDRVKFRRTKFSVIRNS 238
           MATGAVP +F  LKS+ HGLGF ++++FVKV +L RVKFRRTK SVIRNS
Sbjct: 1   MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTKVSVIRNS 50


>ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|AAO15447.1|AF435086_1
           GcpE [Solanum lycopersicum]
          Length = 740

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = +2

Query: 89  MATGAVPTTFMSLKSKGHGLGFTRNVEFVKVSELDRVKFRRTKFSVIRNS 238
           MA G VP +F  LKS  +GLGF +++ F++VS+L RVKFRRTKFSVIRN+
Sbjct: 1   MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNA 50


>gb|AAO24774.1| GCPE protein [Catharanthus roseus]
          Length = 740

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = +2

Query: 89  MATGAVPTTFMSLKSKGHGLGFTRNVEFVKVSELDRVKFRRTKFSVIRNS 238
           MATG VP +F  LKS+ +GLGF ++++FV+VS+L RVKFRR K SVI+NS
Sbjct: 1   MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAKVSVIKNS 50


>gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia
           rebaudiana]
          Length = 740

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +2

Query: 89  MATGAVPTTFMSLKSKGHGLGFTRNVEFVKVSELDRVKFRRTKFSVIRNS 238
           MATGA PT+FMSLK + +GLGF +  +FVKVS+L RVKF RTK  V +NS
Sbjct: 1   MATGAAPTSFMSLKGRENGLGFAKTSDFVKVSDLKRVKFHRTKIFVPKNS 50


>gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase [Rauvolfia
           verticillata]
          Length = 740

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/50 (60%), Positives = 39/50 (78%)
 Frame = +2

Query: 89  MATGAVPTTFMSLKSKGHGLGFTRNVEFVKVSELDRVKFRRTKFSVIRNS 238
           MATG VP +F  LKS  +GLGF ++++FV+VS+L RVKF R K SVI+NS
Sbjct: 1   MATGTVPASFTGLKSGENGLGFAKSIDFVRVSDLRRVKFLRAKVSVIKNS 50


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