BLASTX nr result

ID: Angelica22_contig00022001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00022001
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    98   8e-19
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    92   6e-17
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    92   6e-17
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    92   6e-17
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    85   5e-15

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/76 (55%), Positives = 58/76 (76%)
 Frame = -1

Query: 230  FSIQENQLLYKERAVIPRSSSFVPVLLQIYHSSMVGGHSGDVKTYLRLAKEWFWVGMRKD 51
            F++ +  LL+K R VIP SS+ +P LL  YH + +GGH+G++KTYLRLA EW+W GMR++
Sbjct: 1148 FTLVDGNLLFKGRYVIPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQE 1207

Query: 50   VTAYVQQCEVCQRQKV 3
            V  YV QC +CQ+QKV
Sbjct: 1208 VARYVHQCLICQQQKV 1223


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/87 (43%), Positives = 58/87 (66%)
 Frame = -1

Query: 266  QDLIMGTKKHPGFSIQENQLLYKERAVIPRSSSFVPVLLQIYHSSMVGGHSGDVKTYLRL 87
            + L+      P +SI++ +L YK R V+P++SS +P +L  +H  +VGGHSG ++TY R+
Sbjct: 829  EQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRI 888

Query: 86   AKEWFWVGMRKDVTAYVQQCEVCQRQK 6
            A E +W GM+ D+  YV QC VCQ+ K
Sbjct: 889  AAELYWEGMKNDIKIYVDQCPVCQQNK 915


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/76 (52%), Positives = 53/76 (69%)
 Frame = -1

Query: 233  GFSIQENQLLYKERAVIPRSSSFVPVLLQIYHSSMVGGHSGDVKTYLRLAKEWFWVGMRK 54
            GF+++   L Y  R VIP++      LL+ YHSS +GGHSG  KTY RLA EW+W GM+K
Sbjct: 1080 GFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLAGEWYWKGMKK 1139

Query: 53   DVTAYVQQCEVCQRQK 6
            DVT +VQ C++CQ+ K
Sbjct: 1140 DVTTFVQNCQICQQFK 1155


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/87 (47%), Positives = 60/87 (68%)
 Frame = -1

Query: 266  QDLIMGTKKHPGFSIQENQLLYKERAVIPRSSSFVPVLLQIYHSSMVGGHSGDVKTYLRL 87
            Q L+     +P +S+    LLYK R V+P++S  VP LLQ  H+S+VGGHSG + TY RL
Sbjct: 1684 QRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHASVVGGHSGFLXTYKRL 1743

Query: 86   AKEWFWVGMRKDVTAYVQQCEVCQRQK 6
             +++FWVGM+ D+  +V++C VCQ+ K
Sbjct: 1744 TRDFFWVGMKNDIKEFVEKCLVCQQNK 1770


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/76 (47%), Positives = 52/76 (68%)
 Frame = -1

Query: 233  GFSIQENQLLYKERAVIPRSSSFVPVLLQIYHSSMVGGHSGDVKTYLRLAKEWFWVGMRK 54
            GF+ ++  L +K R V+PR  +    L+  YH++ +GGHSG  KTY RLA EWFW GM++
Sbjct: 916  GFTEEQGVLKFKGRLVVPRKVAMTSRLIHEYHATPMGGHSGIFKTYQRLATEWFWKGMKQ 975

Query: 53   DVTAYVQQCEVCQRQK 6
            DV  ++Q+C VCQ+ K
Sbjct: 976  DVITFIQECAVCQQNK 991


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