BLASTX nr result
ID: Angelica22_contig00021882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00021882
(1654 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 240 5e-88
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984... 226 1e-86
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 232 7e-86
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica] 219 2e-85
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 221 9e-83
>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
Length = 1489
Score = 240 bits (612), Expect(2) = 5e-88
Identities = 116/181 (64%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Frame = +3
Query: 6 VPVIPMVLVNGSEGIGTGWSTFVPNYNPRDIIANIRRLLKGERMQSMDPWYXXXXXXXXX 185
VP IPMVLVNGSEGIGTGWS+ +PNYNPRDIIAN+RRLL GE M+ MDPWY
Sbjct: 825 VPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEK 884
Query: 186 XXXXXXXXX-YTVSGLIKEIDGNTLEITELPIRRWTQDYKKFLESSMTGNDKIKEPLIKD 362
YTV G+I+E++ TL I+ELP+R+WTQDYK+FLES MTGNDKIK+P IKD
Sbjct: 885 TDPTKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKD 944
Query: 363 YRDNGDDVTVKLLVTVSEENMLMAKQEGLLKIFNLTTTISTGNMHLFDHQGVMKKYDNPE 542
Y+++ DD TV V +SEEN+LMAKQEGLL+ F LTT IST NMHLFD G +KKY+ PE
Sbjct: 945 YKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPE 1004
Query: 543 Q 545
Q
Sbjct: 1005 Q 1005
Score = 112 bits (281), Expect(2) = 5e-88
Identities = 68/126 (53%), Positives = 85/126 (67%), Gaps = 12/126 (9%)
Frame = +1
Query: 598 VSFIEGVLDQSIGVGNM-RANLFLDLKEKGFTPFPKKTK-VEEVIAGTTDALE-TEENSE 768
V FI GV+ I V N RA+LF +L +KGFTPFPKK+K VE +AG TD E EEN++
Sbjct: 1040 VRFILGVVRGEIIVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAGATDDTEEAEENTD 1099
Query: 769 G---------DYDYLLQMDIGTFTLERKQKLLKERDKLSGDVDELRKATPESLWNKDLDA 921
DY+YLL M IGT TLE+ Q+L +RDKL+ VD+L+KATP++LW DLDA
Sbjct: 1100 AVSKGGVRATDYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKATPKALWITDLDA 1159
Query: 922 LVAELD 939
L ELD
Sbjct: 1160 LERELD 1165
>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
DNA topoisomerase II [Nicotiana tabacum]
Length = 1482
Score = 226 bits (576), Expect(2) = 1e-86
Identities = 105/179 (58%), Positives = 133/179 (74%)
Frame = +3
Query: 6 VPVIPMVLVNGSEGIGTGWSTFVPNYNPRDIIANIRRLLKGERMQSMDPWYXXXXXXXXX 185
VP++PMVL+NGSEGIGTGWS++VPNYNPRD++AN+RRLL E M+ MDPWY
Sbjct: 821 VPIVPMVLINGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEK 880
Query: 186 XXXXXXXXXYTVSGLIKEIDGNTLEITELPIRRWTQDYKKFLESSMTGNDKIKEPLIKDY 365
YTV+G+I+E++ TL I+ELP+RRWT+DYK+FLES NDK K+P IK+
Sbjct: 881 TATKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEV 940
Query: 366 RDNGDDVTVKLLVTVSEENMLMAKQEGLLKIFNLTTTISTGNMHLFDHQGVMKKYDNPE 542
R GD+ +V V +SEEN+++A+QEGLLK F L TTIST NMHLFD G +KKYDNPE
Sbjct: 941 RAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNPE 999
Score = 122 bits (305), Expect(2) = 1e-86
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = +1
Query: 598 VSFIEGVLDQSIGVGNM-RANLFLDLKEKGFTPFPKKTKVEEVIAGTTDALETEENS--- 765
V FI GV+ I V N RA+L L+LKEKGFTPFPKK VE V+A T+D E E
Sbjct: 1035 VKFILGVVKVEIIVNNRKRADLLLELKEKGFTPFPKKKAVEAVVADTSDDAEDSEEELNR 1094
Query: 766 ---EGDYDYLLQMDIGTFTLERKQKLLKERDKLSGDVDELRKATPESLWNKDLDALVAEL 936
GDYDYLL M IGT TLE+ Q+L ERD+L+G+V+++R ATP+ LW KDLD L +L
Sbjct: 1095 GVRAGDYDYLLSMPIGTLTLEKVQELCAERDQLNGEVEDMRNATPKLLWLKDLDVLEKQL 1154
Query: 937 D 939
D
Sbjct: 1155 D 1155
>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
predicted protein [Populus trichocarpa]
Length = 1468
Score = 232 bits (592), Expect(2) = 7e-86
Identities = 116/185 (62%), Positives = 133/185 (71%), Gaps = 5/185 (2%)
Frame = +3
Query: 6 VPVIPMVLVNGSEGIGTGWSTFVPNYNPRDIIANIRRLLKGERMQSMDPWYXXXXXXXXX 185
+P+IPMVLVNG EGIGTGWSTF+PNYNPRDI+ANIRRLL GE M+ M+PWY
Sbjct: 822 MPIIPMVLVNGCEGIGTGWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEK 881
Query: 186 XXXXXXXXXYTVSGLIKEIDGNTLEITELPIRRWTQDYKKFLESSMTGN-----DKIKEP 350
YTV+G+I E++ TL ITELPIRRWT DYK FL S GN + K+P
Sbjct: 882 GASKEAGCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDP 941
Query: 351 LIKDYRDNGDDVTVKLLVTVSEENMLMAKQEGLLKIFNLTTTISTGNMHLFDHQGVMKKY 530
IKD+R GDD TV V +SEENM++AKQEGLLK F LTTTIST NMHLFD GV+KKY
Sbjct: 942 FIKDFRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKY 1001
Query: 531 DNPEQ 545
DNPEQ
Sbjct: 1002 DNPEQ 1006
Score = 113 bits (283), Expect(2) = 7e-86
Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 8/127 (6%)
Frame = +1
Query: 598 VSFIEGVLDQSIGVGNM-RANLFLDLKEKGFTPFPKKTKVEEVIAGTTDALETEENS--- 765
V FI GV+ I V N RA+LFL+L +KGFTP PKK+K V+AG TD + E+S
Sbjct: 1041 VRFILGVVRGEIIVNNRKRADLFLELHQKGFTPIPKKSKA--VVAGATDDKDEAEDSLEV 1098
Query: 766 ----EGDYDYLLQMDIGTFTLERKQKLLKERDKLSGDVDELRKATPESLWNKDLDALVAE 933
DYDYLL M IGT TLE+ Q+L + DKL+G+VD LRK TP LW KDL+AL +
Sbjct: 1099 SGVRASDYDYLLSMAIGTLTLEKVQQLCADHDKLNGEVDNLRKTTPIVLWVKDLEALEMQ 1158
Query: 934 LDVWSLY 954
LDV Y
Sbjct: 1159 LDVLDKY 1165
>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
Length = 1467
Score = 219 bits (557), Expect(2) = 2e-85
Identities = 105/180 (58%), Positives = 130/180 (72%)
Frame = +3
Query: 6 VPVIPMVLVNGSEGIGTGWSTFVPNYNPRDIIANIRRLLKGERMQSMDPWYXXXXXXXXX 185
VP+IP VLVNGSEGIGTGWS+++PNYNPRDI+AN+RRLL G+ M MDPWY
Sbjct: 792 VPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLDGDAMVPMDPWYRGFTGTIEK 851
Query: 186 XXXXXXXXXYTVSGLIKEIDGNTLEITELPIRRWTQDYKKFLESSMTGNDKIKEPLIKDY 365
YT G+I+E+ +L I+ELPIRRWTQDYK+FLES GNDK K+P I+ +
Sbjct: 852 TVKESGVS-YTACGIIEEVSETSLRISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGF 910
Query: 366 RDNGDDVTVKLLVTVSEENMLMAKQEGLLKIFNLTTTISTGNMHLFDHQGVMKKYDNPEQ 545
+ D TV ++V + EE ++ AKQEGLLK F LTT+IST NMHLFD +GV+KKYD PEQ
Sbjct: 911 TQHSDHSTVDIIVHLREEKLMAAKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQ 970
Score = 125 bits (313), Expect(2) = 2e-85
Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 12/127 (9%)
Frame = +1
Query: 598 VSFIEGVLDQSIGVGNM-RANLFLDLKEKGFTPFPKKTK-VEEVIAGTTDALE-TEENSE 768
V FI GV++ I V N RA+LFL+L++KGFTPFPKKTK +E +AG T+ E EENSE
Sbjct: 1005 VRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKALEPEVAGATENTEDAEENSE 1064
Query: 769 G---------DYDYLLQMDIGTFTLERKQKLLKERDKLSGDVDELRKATPESLWNKDLDA 921
DY+YL+ M IGT T+ER Q LL +RDK + +VDELRK+TP SLW KDLDA
Sbjct: 1065 AAIEKGARISDYEYLISMAIGTLTIERVQALLADRDKANAEVDELRKSTPRSLWLKDLDA 1124
Query: 922 LVAELDV 942
L ELDV
Sbjct: 1125 LEMELDV 1131
>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
predicted protein [Populus trichocarpa]
Length = 1482
Score = 221 bits (564), Expect(2) = 9e-83
Identities = 112/186 (60%), Positives = 130/186 (69%), Gaps = 6/186 (3%)
Frame = +3
Query: 6 VPVIPMVLVNGSEGIGTGWSTFVPNYNPRDIIANIRRLLKGERMQSMDPWYXXXXXXXXX 185
+P+IP VLVNG EGIGTGWSTF+PNYNPRD++ANIRRLL GE M+ M+PWY
Sbjct: 825 MPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRGFKGTIEK 884
Query: 186 XXXXXXXXX-YTVSGLIKEIDGNTLEITELPIRRWTQDYKKFLESSMTGN-----DKIKE 347
YTV+G+I E++ TL ITELPIRRWT DYK FL S G + K+
Sbjct: 885 GASKEGGCSSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGTRDENGNLPKD 944
Query: 348 PLIKDYRDNGDDVTVKLLVTVSEENMLMAKQEGLLKIFNLTTTISTGNMHLFDHQGVMKK 527
P +KD+R GDD V V +SEENML+AKQEGLLK F LTTTIST NMHLFD GV+KK
Sbjct: 945 PFVKDFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKK 1004
Query: 528 YDNPEQ 545
YDNPEQ
Sbjct: 1005 YDNPEQ 1010
Score = 114 bits (284), Expect(2) = 9e-83
Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 8/127 (6%)
Frame = +1
Query: 598 VSFIEGVLDQSIGVGNM-RANLFLDLKEKGFTPFPKKTKVEEVIAGTTDALETEENSE-- 768
V FI GV+ I V N RA+L L+L +KGF P PKK+K V+AG TD E E+S
Sbjct: 1045 VRFILGVVRGEIIVNNRKRADLLLELHQKGFNPIPKKSKA--VVAGATDDTEEAEDSPDV 1102
Query: 769 -----GDYDYLLQMDIGTFTLERKQKLLKERDKLSGDVDELRKATPESLWNKDLDALVAE 933
DYDYLL M IGT TLER Q+L +RDKL+G+VD LRK TP+ LW KDL+AL +
Sbjct: 1103 SGVRASDYDYLLSMAIGTLTLERVQQLCADRDKLNGEVDSLRKTTPKVLWVKDLEALEMQ 1162
Query: 934 LDVWSLY 954
LD+ Y
Sbjct: 1163 LDMLDEY 1169