BLASTX nr result

ID: Angelica22_contig00021875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00021875
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    64   1e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    62   4e-08
gb|EEE69828.1| hypothetical protein OsJ_29581 [Oryza sativa Japo...    61   8e-08
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003605060.1| F-box protein [Medicago truncatula] gi|35550...    61   1e-07

>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -3

Query: 360 ITDDIIYQILLHLPVDSLLRFKSVCKSWFALISSPNFVRSQFXXXXXXXXXXXSDDQLH- 184
           +  D+I +I+  LPV  +LRF+ VCKSW +LIS P FV+ Q                LH 
Sbjct: 29  LPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTR--------NLHF 80

Query: 183 IGHCYDREDESNTSILLVDVACRQIVAHLDFPFSPDEFPYMSFYILVGSACGIVCVS 13
           + + YD     +   +L           ++  F+  ++PY  FY  +GS  GIVC++
Sbjct: 81  LNYAYD-----SRKYILTSYPLDSDFTDINSNFTQSDWPYAKFYRFIGSCNGIVCIA 132


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = -3

Query: 360 ITDDIIYQILLHLPVDSLLRFKSVCKSWFALISSPNFVRSQFXXXXXXXXXXXSDDQLHI 181
           +  D+I +I+  LPV  +LRF+ VCKSW +LIS P FV+ Q                LH 
Sbjct: 29  LPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTR--------NLHF 80

Query: 180 -GHCYDREDESNTSILLVDVACRQIVAHLDFPFSPDEFPYMSFYILVGSACGIVCVS 13
             + YD      TS  L D     I ++    F+  ++PY  FY  +GS  GIVC++
Sbjct: 81  RNYAYDSRKYILTSYPL-DSDFTDITSN----FTQSDWPYAKFYRFIGSCNGIVCLA 132


>gb|EEE69828.1| hypothetical protein OsJ_29581 [Oryza sativa Japonica Group]
          Length = 556

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
 Frame = -3

Query: 396 PSKELKLSV-------PDYITDDIIYQILLHLPVDSLLRFKSVCKSWFALISSPNFV 247
           P K +++++       P YI DD+I+ ILL LP  SL+RFKSVCK+W A+IS+P F+
Sbjct: 166 PGKMMRIAIKSWSRFLPPYIPDDVIFDILLRLPSKSLIRFKSVCKAWHAIISNPCFI 222


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/118 (32%), Positives = 61/118 (51%)
 Frame = -3

Query: 366 DYITDDIIYQILLHLPVDSLLRFKSVCKSWFALISSPNFVRSQFXXXXXXXXXXXSDDQL 187
           DY+++D+I +IL  LP+ SLLR  S+CKSW +LI SP F+                   L
Sbjct: 3   DYLSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDR----QNL 58

Query: 186 HIGHCYDREDESNTSILLVDVACRQIVAHLDFPFSPDEFPYMSFYILVGSACGIVCVS 13
            +     RE E   S+ L +    + +  L FPF   E    S++ ++GS+ G++C++
Sbjct: 59  FLLRLCSREREEQYSLRLDNQDFNEHM-QLHFPFKSSE----SYFHVIGSSNGLICLA 111


>ref|XP_003605060.1| F-box protein [Medicago truncatula] gi|355506115|gb|AES87257.1|
           F-box protein [Medicago truncatula]
          Length = 332

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -3

Query: 390 KELKLSVPDYITDDIIYQILLHLPVDSLLRFKSVCKSWFALISSPNFVRSQF 235
           K+ K +   Y+  ++I+QILL LPV SL RFKSV KSWF+LIS+P+F  S F
Sbjct: 8   KKKKTTTLPYLPHELIFQILLRLPVKSLTRFKSVRKSWFSLISAPHFANSHF 59


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