BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00021803
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
emb|CBI29222.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_003628993.1| Pentatricopeptide repeat-containing protein ...    82   7e-14

>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  117 bits (292), Expect = 2e-24
 Identities = 65/152 (42%), Positives = 89/152 (58%)
 Frame = +2

Query: 119 LYLSIPKTPLTISTPIL*NPIFTMNSRKRLISKPNPIIYFFKCPPICTTSVSQCYQKPIK 298
           ++LS+P  PL      L     +M+ R  L+ KP PI      P  C TS +     P+ 
Sbjct: 48  VHLSMPSKPLKDPISCLHQ---SMDLRITLLPKPTPIFCPIARPLTCVTSAAPHPPSPLP 104

Query: 299 QELQKPKKTELDQRFLDLVISVFSNPCLDSSKCKDILTHLSAHQFDNVFYDIRLSVNAMT 478
            + Q P     D   L  V S+ SNP LDS++CK ++ HLS HQFD+VF+ +R +VN  T
Sbjct: 105 SQNQPPSS---DHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKT 161

Query: 479 SLKFFYFSAKSFRFRFTVRSYCLLLRLLIGSG 574
           +L FFYF++ S  FRFT+RSYC+L+R LI SG
Sbjct: 162 ALNFFYFASDSCGFRFTLRSYCVLMRSLIVSG 193


>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  114 bits (284), Expect = 2e-23
 Identities = 59/129 (45%), Positives = 79/129 (61%)
 Frame = +2

Query: 188 MNSRKRLISKPNPIIYFFKCPPICTTSVSQCYQKPIKQELQKPKKTELDQRFLDLVISVF 367
           M+ R  L+ KP PI      P  C TS +     P+  + Q P     D   L  V S+ 
Sbjct: 1   MDLRITLLPKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSS---DHALLKSVTSIL 57

Query: 368 SNPCLDSSKCKDILTHLSAHQFDNVFYDIRLSVNAMTSLKFFYFSAKSFRFRFTVRSYCL 547
           SNP LDS++CK ++ HLS HQFD+VF+ +R +VN  T+L FFYF++ S  FRFT+RSYC+
Sbjct: 58  SNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCV 117

Query: 548 LLRLLIGSG 574
           L+R LI SG
Sbjct: 118 LMRSLIVSG 126


>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 56/121 (46%), Positives = 72/121 (59%)
 Frame = +2

Query: 209 ISKPNPIIYFFKCPPICTTSVSQCYQKPIKQELQKPKKTELDQRFLDLVISVFSNPCLDS 388
           ISK  P+++ F    +C +S      +P K+  Q P     DQ  L  V SV S+  LDS
Sbjct: 8   ISKTTPVLFPFSRRLVCVSST-----QPHKEHHQDPPWQSQDQLHL-WVSSVLSHSSLDS 61

Query: 389 SKCKDILTHLSAHQFDNVFYDIRLSVNAMTSLKFFYFSAKSFRFRFTVRSYCLLLRLLIG 568
           SKC  +L HLS  QFD +F+ I L  N MT L FFYF++ SF+FRFT+ SYC L+ LLI 
Sbjct: 62  SKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIR 121

Query: 569 S 571
           S
Sbjct: 122 S 122


>ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|222840912|gb|EEE78459.1|
           predicted protein [Populus trichocarpa]
          Length = 836

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
 Frame = +2

Query: 197 RKRLISKPNPIIYFFKCPPICTTSVSQCYQK---------PIKQELQKPKKTELDQRFLD 349
           R+  I+KP  I    K P  C T+  Q   +         P+ Q    P+   L+Q  L 
Sbjct: 2   RRLTITKPIFIQSPLKRPLTCITTTLQKQHQIHPQAPPPPPLLQTQTNPQA--LNQSLLK 59

Query: 350 LVISVFSNPCLDSSKCKDILTHLSAHQFDNVFYDIRLSVNAMTSLKFFYFSAKSFRFRFT 529
            V  + SNP LD +KCK+++ HLS  +FD+ F  ++ +VN  T+L FF+F +++ +FRFT
Sbjct: 60  RVSLILSNPSLDCAKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFT 119

Query: 530 VRSYCLLLRLLIGS 571
            RSYC+L+ LL+G+
Sbjct: 120 ARSYCVLIHLLVGN 133


>ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523015|gb|AET03469.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 819

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 35/73 (47%), Positives = 56/73 (76%)
 Frame = +2

Query: 359 SVFSNPCLDSSKCKDILTHLSAHQFDNVFYDIRLSVNAMTSLKFFYFSAKSFRFRFTVRS 538
           S+ ++  LDSSKCK ++ +L+ H+F++ F+    +VN  T+L FF F++K+F+FRFTVRS
Sbjct: 54  SILAHKVLDSSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRS 113

Query: 539 YCLLLRLLIGSGN 577
           YC+L+RLL+ S +
Sbjct: 114 YCILIRLLLASNH 126