BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00021556
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group...   121   5e-26
gb|ABA97615.1| retrotransposon protein, putative, unclassified [...   121   5e-26
gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-...   121   5e-26
gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subc...   121   5e-26
gb|ABA99218.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   4e-25

>gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|41393196|gb|AAS01919.1| putative polyprotein [Oryza
            sativa Japonica Group] gi|108709171|gb|ABF96966.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1535

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/117 (52%), Positives = 80/117 (68%)
 Frame = -2

Query: 352  GHVISGRGIEVNPDKTRAILDMRPPSTPKQVQSLNGCLTSLRRFISKLAERSLPFFEILK 173
            G ++S RGIE NP+K  AI  M+PPS+  +VQ L G + +L RF+SK AER LPFF+ L+
Sbjct: 913  GFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGLPFFKTLR 972

Query: 172  GVSKSRVIDWTPTCQEAFESLKTYLASPPILSRPILGEPLFLYLAAAEGAVSSCLLR 2
            G  K    +WTP CQ AF+ LK YL SPP+L  P LG  L LYLAA+  AVS+ L++
Sbjct: 973  GAGK---FNWTPECQAAFDKLKQYLQSPPVLISPPLGSELLLYLAASPVAVSAALVQ 1026


>gb|ABA97615.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 827

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/117 (52%), Positives = 80/117 (68%)
 Frame = -2

Query: 352 GHVISGRGIEVNPDKTRAILDMRPPSTPKQVQSLNGCLTSLRRFISKLAERSLPFFEILK 173
           G ++S RGIE NP+K  AI  M+PPS+  +VQ L G +T+L RF+ K+AER LPFF+ L+
Sbjct: 492 GFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRITALSRFLPKVAERGLPFFKTLR 551

Query: 172 GVSKSRVIDWTPTCQEAFESLKTYLASPPILSRPILGEPLFLYLAAAEGAVSSCLLR 2
           G+ K     WTP CQ AF+ LK YL SPP L  P LG  L LYLAA+  AVS+ L++
Sbjct: 552 GMGK---FSWTPECQAAFDELKQYLQSPPALISPTLGSELLLYLAASPVAVSAALVQ 605


>gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1587

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/117 (53%), Positives = 80/117 (68%)
 Frame = -2

Query: 352  GHVISGRGIEVNPDKTRAILDMRPPSTPKQVQSLNGCLTSLRRFISKLAERSLPFFEILK 173
            G ++S RGIEVNP+K  AI  M+PPS+  +VQ L G + +L RF+SK AER+LPFF+ L+
Sbjct: 1017 GFLVSERGIEVNPEKINAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERALPFFKTLR 1076

Query: 172  GVSKSRVIDWTPTCQEAFESLKTYLASPPILSRPILGEPLFLYLAAAEGAVSSCLLR 2
            G  K    +WTP CQ AF+ LK YL SPP L  P LG  L LYLAA+  AVS  L++
Sbjct: 1077 GTGK---FNWTPECQAAFDELKQYLQSPPALISPPLGSELLLYLAASPVAVSVALVQ 1130


>gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1590

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/117 (53%), Positives = 80/117 (68%)
 Frame = -2

Query: 352  GHVISGRGIEVNPDKTRAILDMRPPSTPKQVQSLNGCLTSLRRFISKLAERSLPFFEILK 173
            G ++S RGIEVNP+K  AI  M+PPS+  +VQ L G + +L RF+SK AER+LPFF+ L+
Sbjct: 1015 GFLVSERGIEVNPEKINAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERALPFFKTLR 1074

Query: 172  GVSKSRVIDWTPTCQEAFESLKTYLASPPILSRPILGEPLFLYLAAAEGAVSSCLLR 2
            G  K    +WTP CQ AF+ LK YL SPP L  P LG  L LYLAA+  AVS  L++
Sbjct: 1075 GTGK---FNWTPECQAAFDELKQYLQSPPALISPPLGSELLLYLAASPVAVSVALVQ 1128


>gb|ABA99218.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 938

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/116 (50%), Positives = 78/116 (67%)
 Frame = -2

Query: 352 GHVISGRGIEVNPDKTRAILDMRPPSTPKQVQSLNGCLTSLRRFISKLAERSLPFFEILK 173
           G ++S RGI+ NP+K  AIL+M+PPST K VQ L GC+ +L RF+S+L ER +PFF++LK
Sbjct: 128 GFMVSHRGIQANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLK 187

Query: 172 GVSKSRVIDWTPTCQEAFESLKTYLASPPILSRPILGEPLFLYLAAAEGAVSSCLL 5
              K+    W P  Q+AFE  K  L  PP+L+ P   EPL LY+AAA   VS+ L+
Sbjct: 188 ---KTDDFQWGPDAQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLV 240