BLASTX nr result

ID: Angelica22_contig00021304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00021304
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...   322   4e-86
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   317   1e-84
ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Popu...   317   1e-84
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   317   2e-84
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   313   3e-83

>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
            max]
          Length = 1001

 Score =  322 bits (826), Expect = 4e-86
 Identities = 158/241 (65%), Positives = 197/241 (81%)
 Frame = -1

Query: 725  LVDFTLFLNLSPQQKLEVVELKKLRGRFKISSDGGSIYVHPKLKKLIKYTERKDRLDEVK 546
            LVDFT+ LNLSP+QK EV +LK+L G FK SS G ++Y+HPKLK L + +E+   + +  
Sbjct: 719  LVDFTVVLNLSPRQKPEVEKLKRLSGNFKKSSVGSAVYLHPKLKPLAEKSEKG--ISDNM 776

Query: 545  IDKMLQRLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKGWSPGK 366
            ID ++++LD+  GVK+KF+LN+L LCES GEKLLVFSQYL P+K+LERLT+K KGWS  +
Sbjct: 777  IDALIEKLDVRDGVKSKFFLNMLNLCESAGEKLLVFSQYLLPLKYLERLTMKWKGWSLKR 836

Query: 365  EIFMITGDLDNDARELNMEHFNNSSDSRVLFGSIKACSEGISLVGASRIIVLDVHLNPSV 186
            EIF+I+G+  ++ RE +ME FNNS DS+V FGSIKAC EGISLVGASRII+LDVHLNPSV
Sbjct: 837  EIFVISGETSSEDREWSMERFNNSPDSKVFFGSIKACGEGISLVGASRIIILDVHLNPSV 896

Query: 185  TRQAIGRAFRPGQVRKVYTYRLVAAGSPEEEDHSTCFKKESIPKLWFEWNGVCRPEDFQL 6
            TRQAIGRAFRPGQ +KV+ YRLV+A SPEEEDHSTCFKKE I K+WFEWN  C  + F++
Sbjct: 897  TRQAIGRAFRPGQKKKVFVYRLVSADSPEEEDHSTCFKKELISKMWFEWNEYCGDQAFEV 956

Query: 5    E 3
            E
Sbjct: 957  E 957


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848411|gb|EEE85958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 630

 Score =  317 bits (813), Expect = 1e-84
 Identities = 158/240 (65%), Positives = 191/240 (79%)
 Frame = -1

Query: 725  LVDFTLFLNLSPQQKLEVVELKKLRGRFKISSDGGSIYVHPKLKKLIKYTERKDRLDEVK 546
            LVDFTL LNLS +QK EV +LKKL  +FK SS G ++Y+HPKL    K +   D +    
Sbjct: 367  LVDFTLMLNLSSRQKHEVKKLKKLAMKFKRSSVGSAVYLHPKLNSFSKNSAITDDM---- 422

Query: 545  IDKMLQRLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKGWSPGK 366
            +D +L+ +D+  GVKAKF+LN+L LCES GEKLLVFSQYL P+KFLERL +KVKGW  GK
Sbjct: 423  MDDLLETVDVRDGVKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGK 482

Query: 365  EIFMITGDLDNDARELNMEHFNNSSDSRVLFGSIKACSEGISLVGASRIIVLDVHLNPSV 186
            EIF+I+G+  +D RE +ME FNNS D++V FGSIKAC EGISLVGASRII+LDVHLNPSV
Sbjct: 483  EIFVISGESSSDHREWSMERFNNSMDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSV 542

Query: 185  TRQAIGRAFRPGQVRKVYTYRLVAAGSPEEEDHSTCFKKESIPKLWFEWNGVCRPEDFQL 6
            T QAIGRAFRPGQ +KVY YRLVAA SPEEEDH+TCF+KE+I K+WFEWN  C  +DF++
Sbjct: 543  TCQAIGRAFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKMWFEWNEYCGYQDFEV 602


>ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa]
           gi|222835795|gb|EEE74230.1| hypothetical protein
           POPTRDRAFT_592433 [Populus trichocarpa]
          Length = 387

 Score =  317 bits (813), Expect = 1e-84
 Identities = 156/241 (64%), Positives = 194/241 (80%)
 Frame = -1

Query: 725 LVDFTLFLNLSPQQKLEVVELKKLRGRFKISSDGGSIYVHPKLKKLIKYTERKDRLDEVK 546
           LVDFT+ LNLS +QK EV +LKK  G+FK SS G ++Y+HPKL     ++E     D++ 
Sbjct: 78  LVDFTVVLNLSSKQKHEVQKLKKFAGKFKRSSVGSAVYLHPKLHS---FSENSAVTDDM- 133

Query: 545 IDKMLQRLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKGWSPGK 366
           +D +L+ LD+  G KAKF+LN+L LC+S GEKLLVFSQYL P+KFLERL +KVKGW  GK
Sbjct: 134 MDNLLETLDVRDGAKAKFFLNILSLCKSAGEKLLVFSQYLTPLKFLERLVMKVKGWILGK 193

Query: 365 EIFMITGDLDNDARELNMEHFNNSSDSRVLFGSIKACSEGISLVGASRIIVLDVHLNPSV 186
           +IF+I+G+  +D RE +M+ FNNS D++V FGSIKAC EGISLVGASRII+LDVHLNPSV
Sbjct: 194 DIFVISGESSSDHREWSMDRFNNSIDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSV 253

Query: 185 TRQAIGRAFRPGQVRKVYTYRLVAAGSPEEEDHSTCFKKESIPKLWFEWNGVCRPEDFQL 6
           TRQAIGRAFRPGQ +KVY YRLVAA SPEEEDH+TCF+KE+I K+WFEWN  C  +DF++
Sbjct: 254 TRQAIGRAFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKMWFEWNEYCGYQDFEV 313

Query: 5   E 3
           E
Sbjct: 314 E 314


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  317 bits (811), Expect = 2e-84
 Identities = 156/242 (64%), Positives = 195/242 (80%), Gaps = 1/242 (0%)
 Frame = -1

Query: 725  LVDFTLFLNLSPQQKLEVVELKKL-RGRFKISSDGGSIYVHPKLKKLIKYTERKDRLDEV 549
            LVDFT+ L LSP+QK E+ +LKKL R +FKI+S G ++Y+HPKLK L +        D +
Sbjct: 616  LVDFTVVLTLSPRQKPEIQKLKKLSRRKFKINSVGSAVYLHPKLKPLAENCGENSTSDNI 675

Query: 548  KIDKMLQRLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKGWSPG 369
             +D ++++LD+  GVK+KFY N+L LCES GEKLLVFSQYL P+K+LERLT+K KGWS G
Sbjct: 676  -MDDLIEKLDMRDGVKSKFYYNMLNLCESAGEKLLVFSQYLLPLKYLERLTMKWKGWSLG 734

Query: 368  KEIFMITGDLDNDARELNMEHFNNSSDSRVLFGSIKACSEGISLVGASRIIVLDVHLNPS 189
            +EIF+I+G+  ++ RE +ME FNNS D+RV FGSIKAC EGISLVGASRII+LDVHLNPS
Sbjct: 735  REIFVISGESSSEQREWSMEKFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPS 794

Query: 188  VTRQAIGRAFRPGQVRKVYTYRLVAAGSPEEEDHSTCFKKESIPKLWFEWNGVCRPEDFQ 9
            VTRQAIGRAFRPGQ++KV+ YRLV+A SPEEEDH+TCFKKE I K+WFEWN  C    F+
Sbjct: 795  VTRQAIGRAFRPGQMKKVFVYRLVSADSPEEEDHNTCFKKELISKMWFEWNEYCGDRAFE 854

Query: 8    LE 3
            +E
Sbjct: 855  VE 856


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  313 bits (801), Expect = 3e-83
 Identities = 153/246 (62%), Positives = 195/246 (79%), Gaps = 5/246 (2%)
 Frame = -1

Query: 725  LVDFTLFLNLSPQQKLEVVELKKLRGRFKISSDGGSIYVHPKLKKLI-KYTERKDRLDEV 549
            LVDFT+ LNLS +QK EV  L K   +FK +S G ++Y+HP+LK    K    + + DE+
Sbjct: 631  LVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEM 690

Query: 548  ----KIDKMLQRLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKG 381
                K+D++L++LD+  GVKAKF+LN+L LC+S+GEKLLVFSQYL P++FLE+LT+KVKG
Sbjct: 691  TCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKG 750

Query: 380  WSPGKEIFMITGDLDNDARELNMEHFNNSSDSRVLFGSIKACSEGISLVGASRIIVLDVH 201
            WSPGKEIF I+G+  ++ RE +ME FN S D+RV FGSIKAC EGISLVGASR+++LDVH
Sbjct: 751  WSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVH 810

Query: 200  LNPSVTRQAIGRAFRPGQVRKVYTYRLVAAGSPEEEDHSTCFKKESIPKLWFEWNGVCRP 21
            LNPSVTRQAIGRAFRPGQ +KV+ Y+LVAA SPEEEDH++CFKKE I K+WFEWN  C  
Sbjct: 811  LNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGH 870

Query: 20   EDFQLE 3
             +F+ E
Sbjct: 871  HEFEAE 876


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