BLASTX nr result

ID: Angelica22_contig00020990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020990
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              284   4e-74
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   284   4e-74
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   251   3e-64
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...   249   2e-63
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...   248   4e-63

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  284 bits (727), Expect = 4e-74
 Identities = 164/347 (47%), Positives = 216/347 (62%), Gaps = 15/347 (4%)
 Frame = -2

Query: 1151 KPSIHIIVGAIISAFSITFLIFLYIKHCKTANNAYPNNSRTNIDPYTH--RKNSGIDPNI 978
            +PSI +IVG + + FSITFL+ LY KHCK  N        T   P +   RKNSGID  +
Sbjct: 53   RPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVV----YTGTPPLSSAARKNSGIDRTV 108

Query: 977  IDLLPVFRFSSLKGQKEGLECAVCLTNYEPSEVLRLLPKCKHAFHVECLDTWLDAHSTCP 798
            I+ LPVFRF+SL+GQK+GLECAVCL  +EP+E+LRLLPKCKHAFHVEC+DTWLDAHSTCP
Sbjct: 109  IESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCP 168

Query: 797  LCRHRVEPEDVLLIEHNKPTIXXXXXXXXXXXXXXXXQELIAAIHRTSGRHSSAGEKVTT 618
            LCR+RV+PED+LL+E  K ++                +     + R SGRHSSAGE+ + 
Sbjct: 169  LCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGERRS- 227

Query: 617  NPHGHLQITVQK---QMGSRLSLDSSIKSNKQLSSNSVSLGCFEKPRKDQLLL--DTNKQ 453
               G +QI + K      SR SLDSS  S+++  +  V++GCF++PRKD+LLL  +    
Sbjct: 228  ---GLVQIVLHKPDETTSSRRSLDSSSSSSRK-RNEPVAVGCFDRPRKDELLLTSEDRNS 283

Query: 452  LDHRLHHRIVISS--SDVSYQRWSDVRPSDLLYIKSEMLM----XXXXXXXXXXXXXXXG 291
             + RL HRI++S+  S   +QRWSDV+PSDLLY++SEM++                   G
Sbjct: 284  FERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTIEGGSWSG 343

Query: 290  KMVNKERSLSEIISRKRGMSN--EVXXXXXXXQEGFVSRWLAWVSDT 156
            + V   RS+SEI    R  SN   +       Q G VSRWLAW+S +
Sbjct: 344  RSVINSRSVSEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQS 390


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  284 bits (727), Expect = 4e-74
 Identities = 164/347 (47%), Positives = 216/347 (62%), Gaps = 15/347 (4%)
 Frame = -2

Query: 1151 KPSIHIIVGAIISAFSITFLIFLYIKHCKTANNAYPNNSRTNIDPYTH--RKNSGIDPNI 978
            +PSI +IVG + + FSITFL+ LY KHCK  N        T   P +   RKNSGID  +
Sbjct: 53   RPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVV----YTGTPPLSSAARKNSGIDRTV 108

Query: 977  IDLLPVFRFSSLKGQKEGLECAVCLTNYEPSEVLRLLPKCKHAFHVECLDTWLDAHSTCP 798
            I+ LPVFRF+SL+GQK+GLECAVCL  +EP+E+LRLLPKCKHAFHVEC+DTWLDAHSTCP
Sbjct: 109  IESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCP 168

Query: 797  LCRHRVEPEDVLLIEHNKPTIXXXXXXXXXXXXXXXXQELIAAIHRTSGRHSSAGEKVTT 618
            LCR+RV+PED+LL+E  K ++                +     + R SGRHSSAGE+ + 
Sbjct: 169  LCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGERRS- 227

Query: 617  NPHGHLQITVQK---QMGSRLSLDSSIKSNKQLSSNSVSLGCFEKPRKDQLLL--DTNKQ 453
               G +QI + K      SR SLDSS  S+++  +  V++GCF++PRKD+LLL  +    
Sbjct: 228  ---GLVQIVLHKPDETTSSRRSLDSSSSSSRK-RNEPVAVGCFDRPRKDELLLTSEDRNS 283

Query: 452  LDHRLHHRIVISS--SDVSYQRWSDVRPSDLLYIKSEMLM----XXXXXXXXXXXXXXXG 291
             + RL HRI++S+  S   +QRWSDV+PSDLLY++SEM++                   G
Sbjct: 284  FERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTIEGGSWSG 343

Query: 290  KMVNKERSLSEIISRKRGMSN--EVXXXXXXXQEGFVSRWLAWVSDT 156
            + V   RS+SEI    R  SN   +       Q G VSRWLAW+S +
Sbjct: 344  RSVINSRSVSEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQS 390


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
            gi|223550481|gb|EEF51968.1| ring finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  251 bits (642), Expect = 3e-64
 Identities = 170/403 (42%), Positives = 211/403 (52%), Gaps = 70/403 (17%)
 Frame = -2

Query: 1160 PLLKPSIHIIVGAIISAFSITFLIFLYIKHCKTAN--NAYPNNSR-TNIDPYTHRKNSGI 990
            P  KPSI +IVG + + FSIT L+ LY KHCK A+  N++ N    T       RKNSGI
Sbjct: 73   PPFKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQTAEARKNSGI 132

Query: 989  DPNIIDLLPVFRFSSLKGQKEGLECAVCLTNYEPSEVLRLLPKCKHAFHVECLDTWLDAH 810
            D  +I+ LP+FRFSSL+GQK+GLECAVCLT +EP EVLRLLPKCKHAFHVEC+DTWLDAH
Sbjct: 133  DRAVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCKHAFHVECVDTWLDAH 192

Query: 809  STCPLCRHRVEPEDVLLIEHNKPTIXXXXXXXXXXXXXXXXQELIAAIHRTSGRHSSAGE 630
            STCPLCR+RV+PEDVLLI+ +K                    E+     R SGRHSSAGE
Sbjct: 193  STCPLCRYRVDPEDVLLIDQDKD--PATTTNISLPPPQQQSTEIHGGGRRISGRHSSAGE 250

Query: 629  KVTTNPHGHLQI-----TVQKQMGSRLSLDS-SIKSNKQ---LSSNSVSLGCFEK----P 489
            K +      + +     T Q    +R SLDS S+K NK      + SV++GCF++     
Sbjct: 251  KASGFALSQIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESVAVGCFDRYQSHQ 310

Query: 488  RKDQLLLDTNKQL--------DH-----------------------RLHHRIVISSSDVS 402
            RKD LLL TN           DH                       R  HRI++ S + S
Sbjct: 311  RKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRFEHRIIV-SGNAS 369

Query: 401  YQRWSDVRPSDLLYIKSEMLM---------------------XXXXXXXXXXXXXXXGKM 285
             +RWSDV PSDLLY++SEM++                                    G+ 
Sbjct: 370  DERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKGPSSDGRS 429

Query: 284  VNKERSLSEIISRKRGMSNEVXXXXXXXQE--GFVSRWLAWVS 162
            V   RS+SEI    R    E        +   G VSRWLAW+S
Sbjct: 430  VINGRSVSEITGLNRFSDRESNNSRHHRERQAGVVSRWLAWIS 472


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
            gi|9759106|dbj|BAB09675.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 407

 Score =  249 bits (635), Expect = 2e-63
 Identities = 155/351 (44%), Positives = 200/351 (56%), Gaps = 22/351 (6%)
 Frame = -2

Query: 1154 LKPSIHIIVGAIISAFSITFLIFLYIKHCKTANNA-YPNN-SRTNIDPYTH--------- 1008
            L P I +++  + + FS+TFL+ LY+KHCK  N + Y N+  R  I  Y           
Sbjct: 54   LMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVV 113

Query: 1007 --RKNSGIDPNIIDLLPVFRFSSLKGQKEGLECAVCLTNYEPSEVLRLLPKCKHAFHVEC 834
              RKNSGID ++I+ LPVFRF +L G K+GLECAVCL  +EP+EVLRLLPKCKHAFHVEC
Sbjct: 114  GGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVEC 173

Query: 833  LDTWLDAHSTCPLCRHRVEPEDVLLIEHNKPTIXXXXXXXXXXXXXXXXQEL--IAAIHR 660
            +DTWLDAHSTCPLCR+RV+PED+LLI                         L     + R
Sbjct: 174  VDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSR 233

Query: 659  TSGRHSSAGEKVT-TNPHGHLQITVQKQMGSRLSLDSSIKSNK--QLSSNSVSLGCFEK- 492
             SGRHSSAGE+ +  N            M  R SLDSS+K N   +  S SV++ C ++ 
Sbjct: 234  ISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDRL 293

Query: 491  PRKDQLLLDTNKQ-LDHRLHHRIVISSSDVSYQRWSDVRPSDLLYIKSEMLMXXXXXXXX 315
             RKD LLL  N++  + R  HRI+IS  +   QRWS+VRPSDLLY++SEM++        
Sbjct: 294  QRKDGLLLIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMIL----SDCR 349

Query: 314  XXXXXXXGKMVNKERSLSEI--ISRKRGMSNEVXXXXXXXQEGFVSRWLAW 168
                   G+ V   RS+SE+  I R+R    E            +SRWLAW
Sbjct: 350  KLAAAEGGRDVINGRSVSELTGIERRRRWGGE---PRQRQATAVISRWLAW 397


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
            gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
            thaliana] gi|61656157|gb|AAX49381.1| At5g05810
            [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
            RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score =  248 bits (632), Expect = 4e-63
 Identities = 154/349 (44%), Positives = 199/349 (57%), Gaps = 22/349 (6%)
 Frame = -2

Query: 1148 PSIHIIVGAIISAFSITFLIFLYIKHCKTANNA-YPNN-SRTNIDPYTH----------- 1008
            P I +++  + + FS+TFL+ LY+KHCK  N + Y N+  R  I  Y             
Sbjct: 2    PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 61

Query: 1007 RKNSGIDPNIIDLLPVFRFSSLKGQKEGLECAVCLTNYEPSEVLRLLPKCKHAFHVECLD 828
            RKNSGID ++I+ LPVFRF +L G K+GLECAVCL  +EP+EVLRLLPKCKHAFHVEC+D
Sbjct: 62   RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 121

Query: 827  TWLDAHSTCPLCRHRVEPEDVLLIEHNKPTIXXXXXXXXXXXXXXXXQEL--IAAIHRTS 654
            TWLDAHSTCPLCR+RV+PED+LLI                         L     + R S
Sbjct: 122  TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRIS 181

Query: 653  GRHSSAGEKVT-TNPHGHLQITVQKQMGSRLSLDSSIKSNK--QLSSNSVSLGCFEK-PR 486
            GRHSSAGE+ +  N            M  R SLDSS+K N   +  S SV++ C ++  R
Sbjct: 182  GRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDRLQR 241

Query: 485  KDQLLLDTNKQ-LDHRLHHRIVISSSDVSYQRWSDVRPSDLLYIKSEMLMXXXXXXXXXX 309
            KD LLL  N++  + R  HRI+IS  +   QRWS+VRPSDLLY++SEM++          
Sbjct: 242  KDGLLLIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMIL----SDCRKL 297

Query: 308  XXXXXGKMVNKERSLSEI--ISRKRGMSNEVXXXXXXXQEGFVSRWLAW 168
                 G+ V   RS+SE+  I R+R    E            +SRWLAW
Sbjct: 298  AAAEGGRDVINGRSVSELTGIERRRRWGGE---PRQRQATAVISRWLAW 343


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