BLASTX nr result

ID: Angelica22_contig00020883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020883
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    67   6e-09
emb|CBI37849.3| unnamed protein product [Vitis vinifera]               67   6e-09
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    65   2e-08

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = -2

Query: 674 MDFDEYEYLEKTVQ---PEKLKEKANGDEENVISQGGDKRRSSKNRSEKNGSDTSHRSKR 504
           MDFDEY+YLEKTV+    +K+KE  NG +E V S   ++ RSSK++SE N  D   R KR
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60

Query: 503 TKTEGEKGDRDK 468
           +K+  +  D D+
Sbjct: 61  SKSGDDSRDHDR 72


>emb|CBI37849.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = -2

Query: 674 MDFDEYEYLEKTVQ---PEKLKEKANGDEENVISQGGDKRRSSKNRSEKNGSDTSHRSKR 504
           MDFDEY+YLEKTV+    +K+KE  NG +E V S   ++ RSSK++SE N  D   R KR
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60

Query: 503 TKTEGEKGDRDK 468
           +K+  +  D D+
Sbjct: 61  SKSGDDSRDHDR 72


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
 Frame = -2

Query: 674 MDFDEYEYLEKTV---QPEKLKEKANGDEENVISQGGDKRRSSKNRSEK--NGSDTSHRS 510
           MDFDEYEYLEKTV   +P K KE ANG +  + S   D  RSSK+RS +  +G D + RS
Sbjct: 1   MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60

Query: 509 KRTKTEGEKGDRDK 468
           KR K+  E  D D+
Sbjct: 61  KRPKSGDESRDPDQ 74


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