BLASTX nr result
ID: Angelica22_contig00020883
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00020883 (774 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 67 6e-09 emb|CBI37849.3| unnamed protein product [Vitis vinifera] 67 6e-09 ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 65 2e-08 >ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera] Length = 609 Score = 66.6 bits (161), Expect = 6e-09 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%) Frame = -2 Query: 674 MDFDEYEYLEKTVQ---PEKLKEKANGDEENVISQGGDKRRSSKNRSEKNGSDTSHRSKR 504 MDFDEY+YLEKTV+ +K+KE NG +E V S ++ RSSK++SE N D R KR Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60 Query: 503 TKTEGEKGDRDK 468 +K+ + D D+ Sbjct: 61 SKSGDDSRDHDR 72 >emb|CBI37849.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 66.6 bits (161), Expect = 6e-09 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%) Frame = -2 Query: 674 MDFDEYEYLEKTVQ---PEKLKEKANGDEENVISQGGDKRRSSKNRSEKNGSDTSHRSKR 504 MDFDEY+YLEKTV+ +K+KE NG +E V S ++ RSSK++SE N D R KR Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60 Query: 503 TKTEGEKGDRDK 468 +K+ + D D+ Sbjct: 61 SKSGDDSRDHDR 72 >ref|XP_002516388.1| splicing factor, putative [Ricinus communis] gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis] Length = 609 Score = 64.7 bits (156), Expect = 2e-08 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 5/74 (6%) Frame = -2 Query: 674 MDFDEYEYLEKTV---QPEKLKEKANGDEENVISQGGDKRRSSKNRSEK--NGSDTSHRS 510 MDFDEYEYLEKTV +P K KE ANG + + S D RSSK+RS + +G D + RS Sbjct: 1 MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60 Query: 509 KRTKTEGEKGDRDK 468 KR K+ E D D+ Sbjct: 61 KRPKSGDESRDPDQ 74