BLASTX nr result
ID: Angelica22_contig00020857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00020857
(376 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 71 4e-24
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 71 4e-24
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-24
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,... 74 3e-23
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-22
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 71.2 bits (173), Expect(2) = 4e-24
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQHER 45
N +VNMYAKCGCL+DAR++FDEMP +D+VTWTALI + Q+ R
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNR 169
Score = 65.1 bits (157), Expect(2) = 4e-24
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -1
Query: 373 QDKDLLHKTHNGG---LRVLELIDSGSIKSDATLYNKLLNECAKLGRFKEGKVVHDHLLR 203
QDKDLL K+ + G L L+LI GS+ D LY+KLL EC +LG+ ++G++VH HL+
Sbjct: 56 QDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115
Query: 202 SRFRD 188
S F D
Sbjct: 116 SHFLD 120
Score = 45.4 bits (106), Expect(2) = 8e-07
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQH 51
N +++MYAK G ++DA++VFD + DVV+W ++T QH
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369
Score = 32.3 bits (72), Expect(2) = 8e-07
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -1
Query: 280 YNKLLNECAKLGRFKEGKVVHDHLLRS 200
Y+ +L+ CA +G ++GK VH H+++S
Sbjct: 293 YSSVLSACASIGALEQGKWVHAHMIKS 319
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 71.2 bits (173), Expect(2) = 4e-24
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQHER 45
N +VNMYAKCGCL+DAR++FDEMP +D+VTWTALI + Q+ R
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNR 169
Score = 65.1 bits (157), Expect(2) = 4e-24
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -1
Query: 373 QDKDLLHKTHNGG---LRVLELIDSGSIKSDATLYNKLLNECAKLGRFKEGKVVHDHLLR 203
QDKDLL K+ + G L L+LI GS+ D LY+KLL EC +LG+ ++G++VH HL+
Sbjct: 56 QDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115
Query: 202 SRFRD 188
S F D
Sbjct: 116 SHFLD 120
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQH 51
N +++MYAK G ++DA++VFD + DVV+W ++T QH
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -1
Query: 280 YNKLLNECAKLGRFKEGKVVHDHLLRS 200
Y+ + + CA +G ++GK VH H+++S
Sbjct: 293 YSSVFSACASIGALEQGKWVHAHMIKS 319
>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like, partial [Vitis vinifera]
Length = 262
Score = 71.2 bits (173), Expect(2) = 4e-24
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQHER 45
N +VNMYAKCGCL+DAR++FDEMP +D+VTWTALI + Q+ R
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNR 169
Score = 65.1 bits (157), Expect(2) = 4e-24
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -1
Query: 373 QDKDLLHKTHNGG---LRVLELIDSGSIKSDATLYNKLLNECAKLGRFKEGKVVHDHLLR 203
QDKDLL K+ + G L L+LI GS+ D LY+KLL EC +LG+ ++G++VH HL+
Sbjct: 56 QDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115
Query: 202 SRFRD 188
S F D
Sbjct: 116 SHFLD 120
>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 420
Score = 73.6 bits (179), Expect(2) = 3e-23
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -3
Query: 179 ILNYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQHER 45
I N ++NMYAKCG L +ARKVFD+MPV+DVVTWTALIT Y QH+R
Sbjct: 118 IQNTILNMYAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDR 162
Score = 59.7 bits (143), Expect(2) = 3e-23
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -1
Query: 376 IQDKDLLHKT---HNGGLRVLELIDSGSIKSDATLYNKLLNECAKLGRFKEGKVVHDHLL 206
I++KDLL + GL VL+LID S++ D TLY+ L +C + KEG++VH HLL
Sbjct: 49 IEEKDLLRHSLDQSGTGLHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQLVHAHLL 108
Query: 205 RSRFR 191
SRF+
Sbjct: 109 NSRFK 113
Score = 52.0 bits (123), Expect(2) = 2e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -3
Query: 173 NYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQH 51
N ++ MYAK G +EDARKVFD + RDVV+W +++ Y QH
Sbjct: 322 NTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAGYAQH 362
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 280 YNKLLNECAKLGRFKEGKVVHDHLLRS 200
Y+ +L+ CA +G ++GK VH L++S
Sbjct: 286 YSIVLSACASIGSLEQGKWVHALLIKS 312
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 69.3 bits (168), Expect(2) = 3e-22
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = -1
Query: 376 IQDKDLLHKTHNG--GLRVLELIDSGSIKSDATLYNKLLNECAKLGRFKEGKVVHDHLLR 203
I D++LL + N GL VL+LID GS++ D TLYN LL C +LG+ KEGK+VH H+L
Sbjct: 43 IDDRNLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLN 102
Query: 202 SRFR 191
S F+
Sbjct: 103 SNFK 106
Score = 60.5 bits (145), Expect(2) = 3e-22
Identities = 26/45 (57%), Positives = 37/45 (82%)
Frame = -3
Query: 179 ILNYVVNMYAKCGCLEDARKVFDEMPVRDVVTWTALITEYPQHER 45
I N ++ MYA+CG LE AR++FDEMP RD+V+WT++IT Y Q++R
Sbjct: 111 IQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDR 155