BLASTX nr result

ID: Angelica22_contig00020813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020813
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   110   9e-23
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi...   108   5e-22
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g...   108   6e-22
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   5e-21

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = -3

Query: 300 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 121
           MVN  KGL+ISCDIPMAQFIINMNA++P SQKFI+HVLD THLFV+  +A  IR  ISEF
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 120 REQNTYEKPA 91
           REQN+YEKPA
Sbjct: 61  REQNSYEKPA 70


>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
           gi|222630525|gb|EEE62657.1| hypothetical protein
           OsJ_17460 [Oryza sativa Japonica Group]
          Length = 81

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/77 (64%), Positives = 62/77 (80%)
 Frame = -3

Query: 324 FAKVASDTMVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGS 145
           F    S  MVN IKGL+ISCD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  
Sbjct: 4   FCSPKSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEM 63

Query: 144 IRDKISEFREQNTYEKP 94
           IR KISEFR+QN+YEKP
Sbjct: 64  IRGKISEFRDQNSYEKP 80


>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
           gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
           Os07g0573600 [Oryza sativa Japonica Group]
           gi|215707252|dbj|BAG93712.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199880|gb|EEC82307.1| hypothetical protein
           OsI_26568 [Oryza sativa Indica Group]
           gi|222637319|gb|EEE67451.1| hypothetical protein
           OsJ_24828 [Oryza sativa Japonica Group]
          Length = 131

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/72 (66%), Positives = 62/72 (86%)
 Frame = -3

Query: 309 SDTMVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKI 130
           ++ MVN IKGL+ISCD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  IR KI
Sbjct: 59  AENMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKI 118

Query: 129 SEFREQNTYEKP 94
           SEFR+QN+YEKP
Sbjct: 119 SEFRDQNSYEKP 130


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = -3

Query: 300 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 121
           MVN  KGL+ISCDIPMAQFIIN+NA+LP SQKFI+H+LD TH+FV+  ++  IR  IS+F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 120 REQNTYEKPA 91
           REQN+YEKP+
Sbjct: 61  REQNSYEKPS 70


>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 71

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/69 (65%), Positives = 60/69 (86%)
 Frame = -3

Query: 300 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 121
           MVN IKGL+ISCDIPMAQFI+NMNA++P S KFI+H+LD TH+F++ +M   I+ K++EF
Sbjct: 2   MVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAEF 61

Query: 120 REQNTYEKP 94
           R+QN+YEKP
Sbjct: 62  RDQNSYEKP 70


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