BLASTX nr result

ID: Angelica22_contig00020606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020606
         (195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596877.1| Pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_003626823.1| Pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_002523877.1| pentatricopeptide repeat-containing protein,...    87   1e-15

>ref|XP_003596877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240912|gb|ABD32770.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485925|gb|AES67128.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -2

Query: 191 NTLPGVLKACGGLSGLRIGRIVHGFVVVNGFVLDLANLNGLVTMYAKCGDLVGARKVFDG 12
           +TLP VLK+C GLS LR+G+ VHG V+VNGF LDL N N L+ MYAKCG+L  ARKVFDG
Sbjct: 110 HTLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDG 169

Query: 11  MSE 3
           M E
Sbjct: 170 MCE 172


>ref|XP_003626823.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520845|gb|AET01299.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 355

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -2

Query: 191 NTLPGVLKACGGLSGLRIGRIVHGFVVVNGFVLDLANLNGLVTMYAKCGDLVGARKVFDG 12
           +TLP VLK+C GLS LR+G+ VHG V+VNGF LDL N N L+ MYAKCG+L  ARKVFDG
Sbjct: 110 HTLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDG 169

Query: 11  MSE 3
           M E
Sbjct: 170 MCE 172


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -2

Query: 191 NTLPGVLKACGGLSGLRIGRIVHGFVVVNGFVLDLANLNGLVTMYAKCGDLVGARKVFDG 12
           +TLP VLK+C GLS LR+G+ VHG V+VNGF LDL N N L+ MYAKCG+L  ARKVFDG
Sbjct: 110 HTLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDG 169

Query: 11  MSE 3
           M E
Sbjct: 170 MCE 172


>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449515851|ref|XP_004164961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 308

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = -2

Query: 194 KNTLPGVLKACGGLSGLRIGRIVHGFVVVNGFVLDLANLNGLVTMYAKCGDLVGARKVFD 15
           ++TLP VLK+C GLS LR+GR VHG +++NGF  DL +LN L+TMY KCGDL  ARKVFD
Sbjct: 109 RHTLPPVLKSCTGLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFD 168

Query: 14  GMSE 3
           GM E
Sbjct: 169 GMPE 172


>ref|XP_002523877.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536965|gb|EEF38603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 302

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -2

Query: 194 KNTLPGVLKACGGLSGLRIGRIVHGFVVVNGFVLDLANLNGLVTMYAKCGDLVGARKVFD 15
           ++TLP VLK+C GLS +R+G+ VHG +++NG   DLAN N L+ MYAKCG+L GARKVFD
Sbjct: 105 RHTLPSVLKSCAGLSAVRLGQQVHGILLINGLAFDLANSNALINMYAKCGNLAGARKVFD 164

Query: 14  GM 9
            M
Sbjct: 165 RM 166


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