BLASTX nr result

ID: Angelica22_contig00020586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020586
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata sub...    75   2e-15
ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like ...    79   2e-12
ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thalia...    77   5e-12
ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus ...    72   2e-10

>ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328375|gb|EFH58794.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 74.7 bits (182), Expect(2) = 2e-15
 Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
 Frame = -1

Query: 532 CTRTLSYLEADSCTLETGWIAYIESEGGLEXXXXXXXXXXIRPS-LEMI*TQFALCIRQK 356
           C+ TL Y++A+SC LE   I  I S GG+E          IR   L  I +  A  +R  
Sbjct: 214 CSPTLGYVDAESCQLEPKGIMGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRM- 272

Query: 355 TKSWIFLFVQDSRGDEPIIAITKGCPLL*E*NLALCHEVRLPGWKLITLLCSNLERLLVN 176
               + L +  + GD  I AI KGCPLL E NLALCHEV++ GWK +   C NL++L VN
Sbjct: 273 ----LNLRMCRTVGDASIEAIAKGCPLLQEWNLALCHEVKVSGWKAVGKWCRNLKKLHVN 328



 Score = 34.3 bits (77), Expect(2) = 2e-15
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = -3

Query: 698 KCNASSVGRQTL--AEL*VEEVNVSYYPVDHLLLKGIRALSQN*RQLQAVR 552
           +CN S +G +TL  A L ++ VN+SY P+   L  GI+ALSQ   QL++V+
Sbjct: 151 RCNISDIGLETLARASLSLKCVNLSYCPLVSDL--GIKALSQACLQLESVK 199


>ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like [Glycine max]
          Length = 388

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 50/120 (41%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = -1

Query: 532 CTRTLSYLEADSCTLETGWIAYIESEGGLEXXXXXXXXXXIRPSLEMI*TQFALCIRQKT 353
           C++TL+Y+EA+SC L+   +  I S GG+E          +     +    FA C++   
Sbjct: 213 CSKTLAYVEAESCKLKQEGVMGIVSGGGIEYLDVSCLSWSVLGD-PLPGIGFASCLK--- 268

Query: 352 KSWIFLF-VQDSRGDEPIIAITKGCPLL*E*NLALCHEVRLPGWKLITLLCSNLERLLVN 176
              I  F +  +  D  I+AI KGCPLL E NLALCHEVR PGW+ + L C NL+RL VN
Sbjct: 269 ---ILNFRLCRTVSDTSIVAIAKGCPLLEEWNLALCHEVREPGWRTVGLYCRNLKRLHVN 325


>ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
           gi|30680350|ref|NP_850534.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana]
           gi|75207381|sp|Q9SRR1.1|FBL12_ARATH RecName:
           Full=F-box/LRR-repeat protein 12
           gi|6041850|gb|AAF02159.1|AC009853_19 unknown protein
           [Arabidopsis thaliana] gi|26452863|dbj|BAC43510.1|
           unknown protein [Arabidopsis thaliana]
           gi|30793809|gb|AAP40357.1| putative F-box protein
           family, AtFBL12 [Arabidopsis thaliana]
           gi|332641038|gb|AEE74559.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana] gi|332641039|gb|AEE74560.1|
           F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
          Length = 395

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 53/122 (43%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
 Frame = -1

Query: 538 SRCTRTLSYLEADSCTLETGWIAYIESEGGLEXXXXXXXXXXIRPS-LEMI*TQFALCIR 362
           S C+ TL Y++ADSC LE   I  I S GG+E          IR   L  I +  A  +R
Sbjct: 213 SGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLR 272

Query: 361 QKTKSWIFLFVQDSRGDEPIIAITKGCPLL*E*NLALCHEVRLPGWKLITLLCSNLERLL 182
                 + L +  + GDE I AI KGCPLL E NLALCHEV++ GW+ +   C NL++L 
Sbjct: 273 I-----LNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLH 327

Query: 181 VN 176
           VN
Sbjct: 328 VN 329


>ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|222866786|gb|EEF03917.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = -1

Query: 532 CTRTLSYLEADSCTLETGWIAYIESEGGLEXXXXXXXXXXIR-PSLEMI*TQFALCIRQK 356
           C+ TL++++ADSC L+   I  I S GGLE              +L +I   FA  ++  
Sbjct: 200 CSPTLTHIDADSCNLDPEGIMGIVSGGGLEYLNVSRVNWWRSGDTLAVIGAGFATRLKI- 258

Query: 355 TKSWIFLFVQDSRGDEPIIAITKGCPLL*E*NLALCHEVRLPGWKLITLLCSNLERLLVN 176
               + L++  + GDE I AI +GCPLL E N+ALCH VR+ GW+ I + C+ LE+L VN
Sbjct: 259 ----LNLWLCRTVGDESIAAIARGCPLLQEWNVALCHGVRIAGWQSIGINCNKLEKLHVN 314


>ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223536132|gb|EEF37787.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = -1

Query: 532 CTRTLSYLEADSCTLETGWIAYIESEGGLEXXXXXXXXXXIR-PSLEMI*TQFALCIRQK 356
           C+ TL+Y++A+SC L+   +  I S GGLE          I+   L  I + FA  ++  
Sbjct: 212 CSPTLAYIDAESCNLDPKGVMGIVSGGGLEYLNVSGISWSIKGDGLAAIGSGFAARLKI- 270

Query: 355 TKSWIFLFVQDSRGDEPIIAITKGCPLL*E*NLALCHEVRLPGWKLITLLCSNLERLLVN 176
               + L +  + GDE   AI KGCPLL E NLALCH V++ GW+ I   C+ LE+L VN
Sbjct: 271 ----LNLRMCRTVGDESATAIAKGCPLLQEWNLALCHGVQISGWESIGFGCNRLEKLHVN 326


Top