BLASTX nr result

ID: Angelica22_contig00020447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020447
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_002520026.1| pentatricopeptide repeat-containing protein,...   116   2e-24
gb|AAB61077.1| similar to N. tabacum membrane-associated salt-in...   115   3e-24
ref|NP_198079.1| pentatricopeptide repeat-containing protein [Ar...   115   3e-24
ref|XP_002874390.1| pentatricopeptide repeat-containing protein ...   115   3e-24

>ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Cucumis sativus]
          Length = 1062

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/85 (70%), Positives = 64/85 (75%)
 Frame = -1

Query: 255 SISPDPWSLSDGXXXXXXXXXXXXXXXXXSDDNARRIIKAKAQYLSTLRRNQGSNAQTPR 76
           S++PDPWSLSDG                  DDNARRIIKAKAQYLS LRRNQG  AQTP+
Sbjct: 39  SVTPDPWSLSDGNPARPKPRSKNAKKPLS-DDNARRIIKAKAQYLSVLRRNQGPRAQTPK 97

Query: 75  WIKRSPEQMVQYLEDDRNGHLYGKH 1
           WIKR+PEQMVQYLEDDRNGHLYGKH
Sbjct: 98  WIKRTPEQMVQYLEDDRNGHLYGKH 122


>ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540790|gb|EEF42350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1040

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/86 (66%), Positives = 64/86 (74%)
 Frame = -1

Query: 258 SSISPDPWSLSDGXXXXXXXXXXXXXXXXXSDDNARRIIKAKAQYLSTLRRNQGSNAQTP 79
           SSI  DPWSLSDG                 SDDNARRIIKAKAQYLS LR+++G + QTP
Sbjct: 35  SSIHSDPWSLSDGNDISKPKPRSRNPKKPLSDDNARRIIKAKAQYLSLLRKHKGPHVQTP 94

Query: 78  RWIKRSPEQMVQYLEDDRNGHLYGKH 1
           +WIKR+PEQMV+YLEDDRNGHLYGKH
Sbjct: 95  KWIKRTPEQMVKYLEDDRNGHLYGKH 120


>gb|AAB61077.1| similar to N. tabacum membrane-associated salt-inducible protein
           (PID:g473874) [Arabidopsis thaliana]
          Length = 934

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 SRITCSSISPDPWSLSDGXXXXXXXXXXXXXXXXXSDDNARRIIKAKAQYLSTLRRNQGS 94
           S  + S + PDPWSLSDG                  DD+ARRIIK KAQYLSTLRRNQGS
Sbjct: 32  SSSSSSKVRPDPWSLSDGNPEKPKPRYERPKHPLS-DDDARRIIKKKAQYLSTLRRNQGS 90

Query: 93  NAQTPRWIKRSPEQMVQYLEDDRNGHLYGKH 1
            A TP+WIKR+PEQMVQYLEDDRNG +YGKH
Sbjct: 91  QAMTPKWIKRTPEQMVQYLEDDRNGQMYGKH 121


>ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635757|sp|O04647.2|PP399_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
           gi|332006282|gb|AED93665.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1038

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 SRITCSSISPDPWSLSDGXXXXXXXXXXXXXXXXXSDDNARRIIKAKAQYLSTLRRNQGS 94
           S  + S + PDPWSLSDG                  DD+ARRIIK KAQYLSTLRRNQGS
Sbjct: 32  SSSSSSKVRPDPWSLSDGNPEKPKPRYERPKHPLS-DDDARRIIKKKAQYLSTLRRNQGS 90

Query: 93  NAQTPRWIKRSPEQMVQYLEDDRNGHLYGKH 1
            A TP+WIKR+PEQMVQYLEDDRNG +YGKH
Sbjct: 91  QAMTPKWIKRTPEQMVQYLEDDRNGQMYGKH 121


>ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320227|gb|EFH50649.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1027

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/86 (66%), Positives = 63/86 (73%)
 Frame = -1

Query: 258 SSISPDPWSLSDGXXXXXXXXXXXXXXXXXSDDNARRIIKAKAQYLSTLRRNQGSNAQTP 79
           S + PDPWSLSDG                  DD+ARRIIK KAQYLSTLRRNQGS+A TP
Sbjct: 36  SKVRPDPWSLSDGNPEKPKPRYERPKHPLS-DDDARRIIKKKAQYLSTLRRNQGSHAMTP 94

Query: 78  RWIKRSPEQMVQYLEDDRNGHLYGKH 1
           +WIKR+PEQMVQYLEDDRNG +YGKH
Sbjct: 95  KWIKRTPEQMVQYLEDDRNGQMYGKH 120


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