BLASTX nr result

ID: Angelica22_contig00020409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020409
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321021.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communi...    96   6e-18
ref|NP_001030918.4| transducin/WD40 domain-containing protein [A...    93   4e-17
ref|XP_003591137.1| WD repeat domain phosphoinositide-interactin...    93   4e-17
ref|NP_567132.4| transducin/WD40 domain-containing protein [Arab...    93   4e-17

>ref|XP_002321021.1| predicted protein [Populus trichocarpa] gi|222861794|gb|EEE99336.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
 Frame = +1

Query: 277 NPNPNFALN-----SSPFSSTLSVPPCLTSRTISHIAFNQDYSCFVIATDRGFFIYDVDS 441
           NPNPN   N     SSP  ST S PP ++   + H++FNQD+ CF   TD GF IY+ D 
Sbjct: 12  NPNPNPITNHNTSISSPPQST-STPPLIS---LLHLSFNQDFGCFAAGTDHGFRIYNCDP 67

Query: 442 VKDSFRRE-------PNSGFSIVQLLFKSHIMVCVGSGIESNLSSNKVLVWDDTQSRYNR 600
           +++ FRR+          G  +V++LF+ +I+  VG G +   S NKV++WDD QSR   
Sbjct: 68  LREIFRRDFDGDGNSGGGGIGVVEMLFRCNILAIVGGGPDPQYSPNKVMIWDDHQSRCIG 127

Query: 601 QLXXXXXXXXXXXXNDRIVVVL 666
           +L             DRI+VVL
Sbjct: 128 ELSFRSEVRSVKLRRDRIIVVL 149


>ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communis]
           gi|223528474|gb|EEF30503.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 447

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
 Frame = +1

Query: 277 NPNPNFALNSSPFS-STLSVPPCLTSRTISHIAFNQDYSCFVIATDRGFFIYDVDSVKDS 453
           +PNPN+  ++ P + S+ + PP     ++ H++FNQD+ CF   TD GF IY+ D  ++ 
Sbjct: 68  DPNPNYHHHARPAADSSTTSPPSSPPISLLHLSFNQDFGCFAAGTDHGFRIYNCDPFREI 127

Query: 454 FRRE----PNSGFSIVQLLFKSHIMVCVGSGIESNLSSNKVLVWDDTQSRYNRQLXXXXX 621
           FRR+       G  +V++LF+ +I+  VG G +     NKV++WDD QSR   +L     
Sbjct: 128 FRRDFDRGGGGGIGVVEMLFRCNILALVGGGSDPQYPPNKVMIWDDHQSRCIGELSFRSE 187

Query: 622 XXXXXXXNDRIVVVL 666
                   DRI+VVL
Sbjct: 188 VRSVKLRRDRIIVVL 202


>ref|NP_001030918.4| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332646869|gb|AEE80390.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 396

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
 Frame = +1

Query: 286 PNFALNSSPFSSTLSVPPCLTSRTISHIAFNQDYSCFVIATDRGFFIYDVDSVKDSFRR- 462
           PN   N SP S      P +   ++ H++FNQD++CF + TDRGF I + D  ++ FRR 
Sbjct: 54  PNQTSNQSPLSPPTPNLPVMPPPSVLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRD 113

Query: 463 -EPNSGFSIVQLLFKSHIMVCVGSGIESNLSSNKVLVWDDTQSRYNRQLXXXXXXXXXXX 639
            +   G ++V++LF+ +I+  VG G +     NKV++WDD Q R   +L           
Sbjct: 114 FDRGGGVAVVEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRL 173

Query: 640 XNDRIVVVL 666
             DRI+VVL
Sbjct: 174 RRDRIIVVL 182


>ref|XP_003591137.1| WD repeat domain phosphoinositide-interacting protein [Medicago
           truncatula] gi|355480185|gb|AES61388.1| WD repeat domain
           phosphoinositide-interacting protein [Medicago
           truncatula]
          Length = 385

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
 Frame = +1

Query: 334 PPCLTSRTISHIAFNQDYSCFVIATDRGFFIYDVDSVKDSFRRE--PNSGFSIVQLLFKS 507
           PP  ++  + H++FNQD  CF   TD GF IY+ D  ++ FRR+  PN G  +V +LF+ 
Sbjct: 28  PPLNSTSNVLHLSFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFGPNGGIGLVHMLFRC 87

Query: 508 HIMVCVGSGIESNLSSNKVLVWDDTQSRYNRQLXXXXXXXXXXXXNDRIVVVL 666
           +I+  VG G +    +NKV++WDD QSR   +L             DRIVVVL
Sbjct: 88  NILAFVGGGSDPRYPANKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVL 140


>ref|NP_567132.4| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|14517420|gb|AAK62600.1| AT3g62770/F26K9_200
           [Arabidopsis thaliana] gi|16323362|gb|AAL15394.1|
           AT3g62770/F26K9_200 [Arabidopsis thaliana]
           gi|332646868|gb|AEE80389.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 425

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
 Frame = +1

Query: 286 PNFALNSSPFSSTLSVPPCLTSRTISHIAFNQDYSCFVIATDRGFFIYDVDSVKDSFRR- 462
           PN   N SP S      P +   ++ H++FNQD++CF + TDRGF I + D  ++ FRR 
Sbjct: 54  PNQTSNQSPLSPPTPNLPVMPPPSVLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRD 113

Query: 463 -EPNSGFSIVQLLFKSHIMVCVGSGIESNLSSNKVLVWDDTQSRYNRQLXXXXXXXXXXX 639
            +   G ++V++LF+ +I+  VG G +     NKV++WDD Q R   +L           
Sbjct: 114 FDRGGGVAVVEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRL 173

Query: 640 XNDRIVVVL 666
             DRI+VVL
Sbjct: 174 RRDRIIVVL 182


Top