BLASTX nr result

ID: Angelica22_contig00020291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020291
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24130.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   152   2e-35
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...   127   9e-28
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...   127   1e-27

>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/148 (50%), Positives = 110/148 (74%), Gaps = 15/148 (10%)
 Frame = -1

Query: 399  RRVDELLERCQNISVEEYDRMKVDVQHMQLNVKGKDSQLQEIQRSISEKEERIFHLEQEV 220
            +RV ELLE+ +NI VE+Y+RMK D   MQ+N++ KD+Q++E++R +SEK++RI  LEQ++
Sbjct: 1342 KRVGELLEQSKNIDVEDYERMKHDFHQMQINLREKDAQIEEMKRHVSEKQDRISKLEQDI 1401

Query: 219  GRCRTELDDRERRVNELLKVEASLKSD---------------ENLSKDKEDLNKENQALS 85
               R EL +RE ++N++L+ EA++K++               E LS++KE+L+KENQALS
Sbjct: 1402 ANSRLELSERENKINDILQAEANMKAELEKQKKVTAQLKKRLEALSREKEELSKENQALS 1461

Query: 84   KQLEDFKQGKRNVADAVGEQTMREKEKE 1
            KQLED+KQGKR++ D  GEQ M+EKEKE
Sbjct: 1462 KQLEDYKQGKRSIGDVSGEQAMKEKEKE 1489


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/149 (49%), Positives = 110/149 (73%), Gaps = 16/149 (10%)
 Frame = -1

Query: 399  RRVDELLERCQNISVEEYDRMKVDVQHMQLNVKGKDSQLQEIQRSISEKEERIFHLEQEV 220
            +RV ELLE+ +NI VE+Y+RMK D   MQ+N++ KD+Q++E++R +SEK++RI  LEQ++
Sbjct: 1340 KRVGELLEQSKNIDVEDYERMKHDFHQMQINLREKDAQIEEMKRHVSEKQDRISKLEQDI 1399

Query: 219  GRCRTELDDRERRVNELLKVEASLKSD----------------ENLSKDKEDLNKENQAL 88
               R EL +RE ++N++L+ EA++K++                E LS++KE+L+KENQAL
Sbjct: 1400 ANSRLELSERENKINDILQAEANMKAELEKQKKVTAQLKVVKLEALSREKEELSKENQAL 1459

Query: 87   SKQLEDFKQGKRNVADAVGEQTMREKEKE 1
            SKQLED+KQGKR++ D  GEQ M+EKEKE
Sbjct: 1460 SKQLEDYKQGKRSIGDVSGEQAMKEKEKE 1488


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/133 (46%), Positives = 101/133 (75%)
 Frame = -1

Query: 399  RRVDELLERCQNISVEEYDRMKVDVQHMQLNVKGKDSQLQEIQRSISEKEERIFHLEQEV 220
            +R+ ELLERC+NI VE+Y+RMK D++ M+  ++ KD++++ I+  +SE++E+I  LEQ++
Sbjct: 1344 KRMSELLERCRNIDVEDYNRMKDDLRQMEEKLREKDAEMEGIKNLVSEQQEKILKLEQDL 1403

Query: 219  GRCRTELDDRERRVNELLKVEASLKSDENLSKDKEDLNKENQALSKQLEDFKQGKRNVAD 40
             +  +EL+ RERR++++L+ E   K  E LSK+KE+ +KE QAL KQ+ED KQGKR + +
Sbjct: 1404 AKSESELNQRERRISDILQTE---KKSEILSKEKEEFSKEKQALIKQIEDLKQGKRLLGN 1460

Query: 39   AVGEQTMREKEKE 1
              GEQ ++EKE++
Sbjct: 1461 VTGEQVLKEKEEK 1473


>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/146 (42%), Positives = 101/146 (69%), Gaps = 15/146 (10%)
 Frame = -1

Query: 399  RRVDELLERCQNISVEEYDRMKVDVQHMQLNVKGKDSQLQEIQRSISEKEERIFHLEQEV 220
            ++V ELLER +N+ VE+YDR+K   + +Q  ++ +D++++EI +S+SEK++ +  LE+++
Sbjct: 1344 KKVTELLERSKNVDVEDYDRVKKLAKEIQDKLRERDARIEEIGKSLSEKQDSVSSLEKDL 1403

Query: 219  GRCRTELDDRERRVNELLKVEASLKSDEN---------------LSKDKEDLNKENQALS 85
              CR EL +RE+R+N++L  EA+LK D                 LS++KEDL KENQ LS
Sbjct: 1404 SNCRLELAEREKRINDILHNEANLKLDSEKHRKLLAQFKKRIDVLSREKEDLGKENQQLS 1463

Query: 84   KQLEDFKQGKRNVADAVGEQTMREKE 7
            +QL++ KQGKR+ +D  GEQ M+E++
Sbjct: 1464 RQLDEIKQGKRSTSDTTGEQAMKEEK 1489


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
            gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
            [Ricinus communis]
          Length = 2095

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/151 (40%), Positives = 104/151 (68%), Gaps = 18/151 (11%)
 Frame = -1

Query: 399  RRVDELLERCQNISVEEYDRMKVDVQHMQLNVKGKDSQLQEIQRSISEKEERIFHLEQEV 220
            +R+ E+LER +NI +E+YD+MK  VQ +Q  +K KDS+++E++  + +++E I  LEQ++
Sbjct: 1351 KRISEVLERSKNIDLEDYDQMKNGVQEIQEKMKEKDSEIEEVRNLVLKRQETILKLEQDL 1410

Query: 219  GRCRTELDDRERRVNELLKVEASLKSD------------------ENLSKDKEDLNKENQ 94
             +  +EL  RE+R++++L++EA LKS+                  E+LS++K++ +KE Q
Sbjct: 1411 SKGESELSQREKRISDILQIEAGLKSEVEKQKKLAIQWKVIHKKSESLSREKDEFSKEKQ 1470

Query: 93   ALSKQLEDFKQGKRNVADAVGEQTMREKEKE 1
            ALSKQ+ED KQGKR++ +   EQ M+EKE++
Sbjct: 1471 ALSKQIEDLKQGKRSLGNVSSEQVMKEKEEK 1501


Top