BLASTX nr result

ID: Angelica22_contig00020194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020194
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327962.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
dbj|BAD05505.1| PPR protein-like [Oryza sativa Japonica Group] g...    78   7e-13
ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group] g...    78   7e-13
ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002322585.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002327962.1| predicted protein [Populus trichocarpa] gi|222837371|gb|EEE75750.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/89 (43%), Positives = 57/89 (64%)
 Frame = -2

Query: 270 RGIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVD 91
           +G +PN+ +YNILINGYCK  ++D A +LF ++   GL P    Y+T++ G    GRH +
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 90  ARKFFKEKMMLNKGLTLNKVTCIILLRGL 4
           AR+ FK+  M  +G + + VTC ILL  L
Sbjct: 418 ARELFKD--MQAQGCSPDLVTCTILLDSL 444


>dbj|BAD05505.1| PPR protein-like [Oryza sativa Japonica Group]
           gi|40253737|dbj|BAD05677.1| PPR protein-like [Oryza
           sativa Japonica Group]
          Length = 297

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/88 (42%), Positives = 59/88 (67%)
 Frame = -2

Query: 267 GIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVDA 88
           G+ P+  TY+ LINGYCK  +++ A+ LF+Q+ C G+SP I TY+ +LQG F TG+   A
Sbjct: 15  GLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAA 74

Query: 87  RKFFKEKMMLNKGLTLNKVTCIILLRGL 4
           ++ +    ++ +G+ L   TC I+L+GL
Sbjct: 75  KEIYVR--IIKRGIQLEISTCNIVLQGL 100


>ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
            gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa
            Japonica Group]
          Length = 1487

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/88 (42%), Positives = 59/88 (67%)
 Frame = -2

Query: 267  GIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVDA 88
            G+ P+  TY+ LINGYCK  +++ A+ LF+Q+ C G+SP I TY+ +LQG F TG+   A
Sbjct: 1237 GLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAA 1296

Query: 87   RKFFKEKMMLNKGLTLNKVTCIILLRGL 4
            ++ +    ++ +G+ L   TC I+L+GL
Sbjct: 1297 KEIYVR--IIKRGIQLEISTCNIVLQGL 1322



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/85 (36%), Positives = 50/85 (58%)
 Frame = -2

Query: 255  NIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVDARKFF 76
            ++ TY+ LI+GYC   K+D A+ L   +   GL P   TYST++ G+    R  +A   F
Sbjct: 1206 DVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLF 1265

Query: 75   KEKMMLNKGLTLNKVTCIILLRGLF 1
            ++  M+  G++ N +T  I+L+GLF
Sbjct: 1266 RQ--MVCNGVSPNIITYNIVLQGLF 1288


>ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|222857977|gb|EEE95524.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/89 (43%), Positives = 58/89 (65%)
 Frame = -2

Query: 270 RGIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVD 91
           +G  PN+R+YNILING+CK  ++D A  L  ++  + L+P I TYST+++GF   GR  +
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273

Query: 90  ARKFFKEKMMLNKGLTLNKVTCIILLRGL 4
           A++  KE  M + GL  N +T  I+L GL
Sbjct: 274 AQELLKE--MCSYGLLPNLITYSIVLDGL 300



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = -2

Query: 270 RGIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVD 91
           +G  PN+  YN +I+  CK   V  A+D F ++  EG+ P + TYS+IL GF + GR  +
Sbjct: 74  KGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNE 133

Query: 90  ARKFFKEKMMLNKGLTLNKVTCIILLRGL 4
           A   FK+  M+ + +  NKVT  IL+ GL
Sbjct: 134 ATSLFKQ--MVERNVIPNKVTFTILIDGL 160



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/88 (32%), Positives = 52/88 (59%)
 Frame = -2

Query: 270 RGIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVD 91
           +G+ P++ TYN L++GYC + ++D A  LF  +  +G +P + +Y+ ++ G   +GR  +
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238

Query: 90  ARKFFKEKMMLNKGLTLNKVTCIILLRG 7
           A+    E  M +K LT +  T   L+RG
Sbjct: 239 AKGLLAE--MSHKSLTPDIFTYSTLMRG 264


>ref|XP_002322585.1| predicted protein [Populus trichocarpa] gi|222867215|gb|EEF04346.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/89 (42%), Positives = 58/89 (65%)
 Frame = -2

Query: 270 RGIVPNIRTYNILINGYCKKLKVDRAIDLFQQLPCEGLSPTIETYSTILQGFFHTGRHVD 91
           +G +PN+ +YNILING CK L++D A  LF ++   GL P   +Y+T++ G F  GR ++
Sbjct: 4   QGCMPNVLSYNILINGSCKALRIDEAKQLFDEMSFRGLIPNTASYNTLISGLFQVGRILE 63

Query: 90  ARKFFKEKMMLNKGLTLNKVTCIILLRGL 4
           A++ FK+  M  +G + + VT  ILL GL
Sbjct: 64  AKELFKD--MHAQGCSPDLVTYSILLDGL 90


Top