BLASTX nr result

ID: Angelica22_contig00020045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00020045
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsi...    96   9e-18
ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-contain...    94   3e-17
emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]    92   1e-16
ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycin...    79   1e-12
ref|XP_002313451.1| methyl binding domain protein [Populus trich...    73   6e-11

>ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsis thaliana]
           gi|75171028|sp|Q9FJF4.1|MBD7_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 7;
           Short=AtMBD7; Short=MBD07; AltName:
           Full=Methyl-CpG-binding protein MBD7
           gi|9757900|dbj|BAB08347.1| unnamed protein product
           [Arabidopsis thaliana] gi|50198785|gb|AAT70426.1|
           At5g59800 [Arabidopsis thaliana]
           gi|53828603|gb|AAU94411.1| At5g59800 [Arabidopsis
           thaliana] gi|332009852|gb|AED97235.1| methyl-CPG-binding
           domain 7 protein [Arabidopsis thaliana]
          Length = 306

 Score = 95.5 bits (236), Expect = 9e-18
 Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
 Frame = +3

Query: 12  FSLPEGWEVEEVPRADASRVDRYYYETSTGNKFRSLREVERYINGEVYTPRRRRSKTLRL 191
           F LP GW VEEVPR ++  +D+YY E  TG +FRSL  VERY+                 
Sbjct: 114 FRLPRGWSVEEVPRKNSHYIDKYYVERKTGKRFRSLVSVERYLR---------------- 157

Query: 192 GYHGSRGTSQNSGYRKMVVSGGKLLKLEDEDPNQYQMAIVPSRSISFSTSGGRLPEGRLP 371
                                      E  +  + Q+ ++ +R        G   + RLP
Sbjct: 158 ---------------------------ESRNSIEQQLRVLQNRR-------GHSKDFRLP 183

Query: 372 EGWVVEEVPRNRRDGYVDRYYYEPGTGRKFRSLLSVQRHLAEQNENNTLTQTLAELKEYN 551
           +GW+VEE PR R   ++DR Y EPGTG KFRS+ +V+R+L   +  N    +++ +    
Sbjct: 184 DGWIVEEKPR-RSSSHIDRSYIEPGTGNKFRSMAAVERYLI--SVGNITLDSVSMVHSER 240

Query: 552 TPLSKAFKIGSNVKSSNSLWKNTIPRDKVQSATFN-SPPLKINWVIASS 695
            PL         + + N +        + QS   + +PP K+ WV+  S
Sbjct: 241 LPL---------LMNRNGI--------RFQSEVIDPNPPKKVKWVLTGS 272



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +3

Query: 360 GRLPEGWVVEEVPRNRRDGYVDRYYYEPGTGRKFRSLLSVQRHLAEQNENNTLTQ 524
           G++  GW V   PR+  +G VD Y+ EPGTGR+F SL ++ RHLA +  +  LT+
Sbjct: 29  GKIMPGWTVVNRPRSSNNGVVDTYFIEPGTGRQFSSLEAIHRHLAGEVNDRRLTR 83


>ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Vitis vinifera] gi|297746130|emb|CBI16186.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 69/228 (30%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
 Frame = +3

Query: 12  FSLPEGWEVEEVPRADASR---VDRYYYETSTGNKFRSLREVERYINGEVYTPRRRRSKT 182
           F LP  W V +V RA       +D+YYYE  TG +FRSL+ +++Y+  ++          
Sbjct: 10  FKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKM---------- 59

Query: 183 LRLGYHGSRGTSQNSGYRKMVVSGGKLLKLEDEDPNQYQMAIVPSRSISFSTSGGRLPEG 362
                     T +  G  K         + E+E P+Q     +              P  
Sbjct: 60  --------ENTPKILGPDK---------EEEEEQPHQKMAMQIMD------------PNL 90

Query: 363 RLPEGWVVEEVPRNRRDGYVDRYYYEPGTGRKFRSLLSVQRHLAEQNENNTLTQTLAELK 542
            LP+ WV ++  R+   G + +YYYEPGTGR+FRSL SVQRHL E N+            
Sbjct: 91  ELPDNWVFQK--RSSSSGQIHKYYYEPGTGRQFRSLKSVQRHLIEAND-------CTHKP 141

Query: 543 EYNTPLSKAFKIGSNVKSSNSLWKNTIPRDKVQSATFNSPPLKINWVI 686
             N+  SK     + VK+S S               F  PP K+NWV+
Sbjct: 142 SQNSDASKKNNSSTKVKTSTS--------------HFIKPPKKVNWVL 175


>emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]
          Length = 212

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
 Frame = +3

Query: 12  FSLPEGWEVEEVPRADASR---VDRYYYETSTGNKFRSLREVERYINGEVYTPRRRRSKT 182
           F LP  W V +V RA       +D+YYYE  TG +FRSL+ +++Y+  ++          
Sbjct: 10  FKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKM---------- 59

Query: 183 LRLGYHGSRGTSQNSGYRKMVVSGGKLLKLEDEDPNQYQMAIVPSRSISFSTSGGRLPEG 362
                     T +  G  K         + E+E P+Q     +              P  
Sbjct: 60  --------ENTPKILGPDK---------EEEEEQPHQKMAMQIMD------------PNL 90

Query: 363 RLPEGWVVEEVPRNRRDGYVDRYYYEPGTGRKFRSLLSVQRHLAEQNENNTLTQTLAELK 542
            LP+ WV ++  R+   G + +YYYEPG GR+FRSL SVQRHL E N+            
Sbjct: 91  ELPDNWVFQK--RSSSSGQIHKYYYEPGXGRQFRSLKSVQRHLIEAND-------CTHKP 141

Query: 543 EYNTPLSKAFKIGSNVKSSNSLWKNTIPRDKVQSATFNSPPLKINWVI 686
             N+  SK     + VK+S S               F  PP K+NWV+
Sbjct: 142 SQNSDASKKNNSSTKVKTSTS--------------HFIKPPKKVNWVL 175


>ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycine max]
           gi|255634513|gb|ACU17620.1| unknown [Glycine max]
          Length = 261

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
 Frame = +3

Query: 363 RLPEGWVVEEVPRNRRDGYVDRYYYEPGTGRKFRSLLSVQRHLAEQNENNTLTQTLAELK 542
           RLP+GWVVE+ PR   +   D+YYYEPGTGRKFRSLLSVQRHLA +  +  +  T+    
Sbjct: 42  RLPDGWVVEKKPRPSHESRFDKYYYEPGTGRKFRSLLSVQRHLAGETRDYVVANTMMPKN 101

Query: 543 EYNTPLSKAF--KIGSNVKSSNSLWK----NTIPRDKVQSAT 650
           E    +      K GS     N L +     T P+  V+S T
Sbjct: 102 ENTNFIESGSGQKFGSLRALDNFLSEENACTTTPKSAVKSGT 143



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 12  FSLPEGWEVEEVPR-ADASRVDRYYYETSTGNKFRSLREVERYINGE 149
           F LP+GW VE+ PR +  SR D+YYYE  TG KFRSL  V+R++ GE
Sbjct: 41  FRLPDGWVVEKKPRPSHESRFDKYYYEPGTGRKFRSLLSVQRHLAGE 87


>ref|XP_002313451.1| methyl binding domain protein [Populus trichocarpa]
           gi|222849859|gb|EEE87406.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 236

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
 Frame = +3

Query: 78  YYYETSTGNKFRSLREVERYINGEVYTPRRRRSKTLRLGYHGSRGTSQNSGYRKMVVSGG 257
           Y+YE  TG +F SL  ++++++GE                      S   G +K +    
Sbjct: 50  YHYEPGTGQRFCSLISIQKHLSGET-------------------SKSAKPGNKKKI---- 86

Query: 258 KLLKLEDEDPNQYQMAIVPSRSISFSTSGGRLPEGRLPEGWVVEEVPRNRRD--GYVDRY 431
                      Q    I  SRS+             LP GW+VE+ PR   +  G +D++
Sbjct: 87  -----------QIDPYIFKSRSLF-----------DLPNGWIVEKKPRKNMECAGIIDKH 124

Query: 432 YYEPGTGRKFRSLLSVQRHLAEQNENNTLTQTLAELKEYNTPLSKAFKIGSNV--KSSNS 605
           Y+EP TG++FRSL SV+++L E  E+      +A L        +A K G N     S+S
Sbjct: 125 YFEPETGKRFRSLRSVEKYLTEGKEH------IATL--------EALKAGDNFIPSKSSS 170

Query: 606 LWKNTIPRDKVQSATF--NSPPLKINWVIA 689
             K  + R KV+++    +S P KI WV++
Sbjct: 171 SQKEHVSRKKVETSMLDPSSIPAKIKWVLS 200


Top