BLASTX nr result

ID: Angelica22_contig00019992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019992
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...    67   1e-09
emb|CBI27426.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arab...    61   8e-08
ref|NP_001045601.1| Os02g0102900 [Oryza sativa Japonica Group] g...    60   2e-07
ref|XP_003574065.1| PREDICTED: ruBisCO large subunit-binding pro...    60   2e-07

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/68 (55%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   ILDPSKVVRCCIEHAASVAKTFLTSDAVVIYIDEXXXXXXXXXXXDLGDPAPSRRRPMPD 182
           I+DPSKVVRCC+EHAASVAKTFLTSDAVV+ I E              D  P RR+PMP 
Sbjct: 522 IMDPSKVVRCCLEHAASVAKTFLTSDAVVVDIKEL-------------DLIP-RRKPMPP 567

Query: 183 LGDLAPSS 206
           +  + P S
Sbjct: 568 MSPMPPVS 575


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/68 (55%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   ILDPSKVVRCCIEHAASVAKTFLTSDAVVIYIDEXXXXXXXXXXXDLGDPAPSRRRPMPD 182
           I+DPSKVVRCC+EHAASVAKTFLTSDAVV+ I E              D  P RR+PMP 
Sbjct: 496 IMDPSKVVRCCLEHAASVAKTFLTSDAVVVDIKEL-------------DLIP-RRKPMPP 541

Query: 183 LGDLAPSS 206
           +  + P S
Sbjct: 542 MSPMPPVS 549


>ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arabidopsis lyrata subsp.
           lyrata] gi|297336511|gb|EFH66928.1| hypothetical protein
           ARALYDRAFT_890123 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +3

Query: 3   ILDPSKVVRCCIEHAASVAKTFLTSDAVVIYIDEXXXXXXXXXXXDLGDPAPSRR---RP 173
           I+DP+KVVRCC+EHAASVA+TFLTSD V++ I E               PA S     R 
Sbjct: 461 IIDPTKVVRCCLEHAASVAQTFLTSDCVIVEIKEIKPRPIINPPLPTSSPATSSMFPDRK 520

Query: 174 MPDLGDLAPSSR 209
           +P    + P +R
Sbjct: 521 LPSFPQIMPRTR 532


>ref|NP_001045601.1| Os02g0102900 [Oryza sativa Japonica Group]
           gi|41052909|dbj|BAD07821.1| putative RuBisCO subunit
           binding-protein beta subunit, chloroplast precursor
           [Oryza sativa Japonica Group]
           gi|113535132|dbj|BAF07515.1| Os02g0102900 [Oryza sativa
           Japonica Group] gi|218189867|gb|EEC72294.1| hypothetical
           protein OsI_05469 [Oryza sativa Indica Group]
           gi|222621999|gb|EEE56131.1| hypothetical protein
           OsJ_05004 [Oryza sativa Japonica Group]
           gi|313575775|gb|ADR66967.1| 60 kDa chaperonin beta
           subunit [Oryza sativa Japonica Group]
          Length = 598

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   ILDPSKVVRCCIEHAASVAKTFLTSDAVVIYIDE 104
           I+DP+KVVRCC+EHAASVAKTF+TSDAVV+ I E
Sbjct: 547 IIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKE 580


>ref|XP_003574065.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Brachypodium distachyon]
          Length = 598

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   ILDPSKVVRCCIEHAASVAKTFLTSDAVVIYIDE 104
           I+DP+KVVRCC+EHAASVAKTF+TSDAVV+ I E
Sbjct: 548 IIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKE 581


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