BLASTX nr result

ID: Angelica22_contig00019988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019988
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   152   4e-35
gb|ACN39870.1| unknown [Picea sitchensis]                             149   2e-34
emb|CBI34673.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   149   2e-34
ref|XP_002298036.1| tubulin, beta chain [Populus trichocarpa] gi...   149   2e-34

>ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/131 (61%), Positives = 81/131 (61%)
 Frame = -3

Query: 395 GTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGXXXXXXXXXXXXXXXXXXXXX 216
           GTMDSLRTGPYGNIFRPDNF+FGQNGAGNNWAKGHYTEG                     
Sbjct: 71  GTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEG--------------------- 109

Query: 215 XXXXXXXXXXXXXXXXDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPD 36
                           DVVRKEAENCDCLQGFQVCH             LISKIREEYPD
Sbjct: 110 --------AELVDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPD 161

Query: 35  RMMLTFSVFPS 3
           RMMLTFSVFPS
Sbjct: 162 RMMLTFSVFPS 172


>gb|ACN39870.1| unknown [Picea sitchensis]
          Length = 445

 Score =  149 bits (377), Expect = 2e-34
 Identities = 78/131 (59%), Positives = 80/131 (61%)
 Frame = -3

Query: 395 GTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGXXXXXXXXXXXXXXXXXXXXX 216
           GTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEG                     
Sbjct: 71  GTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEG--------------------- 109

Query: 215 XXXXXXXXXXXXXXXXDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPD 36
                           DVVRKEAENCDCLQGFQVCH             +ISKIREEYPD
Sbjct: 110 --------AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLIISKIREEYPD 161

Query: 35  RMMLTFSVFPS 3
           RMMLTFSVFPS
Sbjct: 162 RMMLTFSVFPS 172


>emb|CBI34673.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  149 bits (376), Expect = 2e-34
 Identities = 78/131 (59%), Positives = 80/131 (61%)
 Frame = -3

Query: 395 GTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGXXXXXXXXXXXXXXXXXXXXX 216
           GTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEG                     
Sbjct: 35  GTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEG--------------------- 73

Query: 215 XXXXXXXXXXXXXXXXDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPD 36
                           DVVRKEAENCDCLQGFQ+CH             LISKIREEYPD
Sbjct: 74  --------AELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPD 125

Query: 35  RMMLTFSVFPS 3
           RMMLTFSVFPS
Sbjct: 126 RMMLTFSVFPS 136


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  149 bits (376), Expect = 2e-34
 Identities = 78/131 (59%), Positives = 80/131 (61%)
 Frame = -3

Query: 395 GTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGXXXXXXXXXXXXXXXXXXXXX 216
           GTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEG                     
Sbjct: 71  GTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEG--------------------- 109

Query: 215 XXXXXXXXXXXXXXXXDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPD 36
                           DVVRKEAENCDCLQGFQ+CH             LISKIREEYPD
Sbjct: 110 --------AELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPD 161

Query: 35  RMMLTFSVFPS 3
           RMMLTFSVFPS
Sbjct: 162 RMMLTFSVFPS 172


>ref|XP_002298036.1| tubulin, beta chain [Populus trichocarpa]
           gi|222845294|gb|EEE82841.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  149 bits (376), Expect = 2e-34
 Identities = 78/131 (59%), Positives = 80/131 (61%)
 Frame = -3

Query: 395 GTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGXXXXXXXXXXXXXXXXXXXXX 216
           GTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEG                     
Sbjct: 71  GTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEG--------------------- 109

Query: 215 XXXXXXXXXXXXXXXXDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPD 36
                           DVVRKEAENCDCLQGFQ+CH             LISKIREEYPD
Sbjct: 110 --------AELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPD 161

Query: 35  RMMLTFSVFPS 3
           RMMLTFSVFPS
Sbjct: 162 RMMLTFSVFPS 172


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