BLASTX nr result

ID: Angelica22_contig00019893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019893
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...   112   2e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               111   5e-23
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               109   2e-22
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       109   3e-22

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  130 bits (328), Expect = 9e-29
 Identities = 59/158 (37%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
 Frame = -3

Query: 471 LPASVHRKLQTIFTRFLWKGDVDSKGGAKISWDKICRPFEEGGLGLKNLRDWNQAQLLYH 292
           LP  V + ++ I   FLW G      GAK++WD++C P +EGGLG+K++++WN+  LL H
Sbjct: 118 LPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKH 177

Query: 291 LCGIVRKGP-ALWSCWVNTTMLKRHSFWTMPMPTDCSWIFRNVLKIRPLARRFISYKIGN 115
           +  +      ++WS W+ + +L+  +FWT+  P +CSW +  +LK+R LA   + Y IG+
Sbjct: 178 IWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGD 237

Query: 114 GLGTSLWFDPWWNSSCLAITRFDSIIAQSNLPHDSVVH 1
           G+ TSLWFD W   S LA +  +  I  S +  ++ V+
Sbjct: 238 GMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVN 275


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score =  112 bits (281), Expect = 2e-23
 Identities = 47/130 (36%), Positives = 74/130 (56%)
 Frame = -3

Query: 471 LPASVHRKLQTIFTRFLWKGDVDSKGGAKISWDKICRPFEEGGLGLKNLRDWNQAQLLYH 292
           LP  VHR +  I   + W+G  + +GG K++WD++C PF+EGGL +++   WN A  L  
Sbjct: 101 LPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSSWNIASTLKI 160

Query: 291 LCGIVRKGPALWSCWVNTTMLKRHSFWTMPMPTDCSWIFRNVLKIRPLARRFISYKIGNG 112
           L  ++ K  +LW  WV   +LK  S W + +    SW FR +L+ R +    ++ ++GNG
Sbjct: 161 LWLLLVKSGSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEAHVNIEVGNG 220

Query: 111 LGTSLWFDPW 82
               +W DPW
Sbjct: 221 KKCRVWLDPW 230


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
 Frame = -3

Query: 471 LPASVHRKLQTIFTRFLWKGDVDSKGGAKISWDKICRPFEEGGLGLKNLRDWNQAQLLYH 292
           LP    R++  + + FLW G   S   AKISWD +C+P  EGGLGL+NL++ N    L  
Sbjct: 478 LPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKL 537

Query: 291 LCGIVRKGPALWSCWVNTTMLKRHSFWTMPMPTDC-SWIFRNVLKIRPLARRFISYKIGN 115
           +  I+    +LW+ WV   ++++ S W++   T   SWI+R +LKIR +A+ F   ++GN
Sbjct: 538 VWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGN 597

Query: 114 GLGTSLWFDPWWNSSCLAITRFDSIIAQSNLPHDSVV 4
           G   S W+D W     L  T  D       +P ++ V
Sbjct: 598 GESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASV 634


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
 Frame = -3

Query: 471 LPASVHRKLQTIFTRFLWKGDVDSKGGAKISWDKICRPFEEGGLGLKNLRDWNQAQLLYH 292
           LP +  ++++ + + FLW G   +   AKISW+++C+P  EGGLGL++L++ N    L  
Sbjct: 384 LPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKL 443

Query: 291 LCGIVRKGPALWSCWVNTTMLKRHSFWTMPMPTDC-SWIFRNVLKIRPLARRFISYKIGN 115
           +  I+  G +LW  WV   +LKR  FW +    +  SWI++ +LK R +A+RF   ++GN
Sbjct: 444 VWRIISHGDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGN 503

Query: 114 GLGTSLWFDPW 82
           G  TS WFD W
Sbjct: 504 GESTSFWFDDW 514


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/130 (35%), Positives = 76/130 (58%)
 Frame = -3

Query: 471  LPASVHRKLQTIFTRFLWKGDVDSKGGAKISWDKICRPFEEGGLGLKNLRDWNQAQLLYH 292
            LP    ++++++ +RFLW G+++   G K+SW  +C P  EGGLGL+ L +WN+   +  
Sbjct: 824  LPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRL 883

Query: 291  LCGIVRKGPALWSCWVNTTMLKRHSFWTMPMPTDCSWIFRNVLKIRPLARRFISYKIGNG 112
            +  +     +LW+ W +   L R SFW +      SW ++ +L +RPLA +F+  K+GNG
Sbjct: 884  IWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNG 943

Query: 111  LGTSLWFDPW 82
            L    W+D W
Sbjct: 944  LKADYWYDNW 953


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