BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019813
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     167   2e-39
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   159   8e-37
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   156   4e-36
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   156   4e-36
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   155   9e-36

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  167 bits (423), Expect = 2e-39
 Identities = 84/145 (57%), Positives = 106/145 (73%)
 Frame = -2

Query: 669 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 490
           M+   F+DI  + R+D DGKK+DKVSRIEARSEQ +M +QLDVN+E+ P+ VGD F MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 489 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVAHLSFGGLQL 310
           A TL+ DG+  +    +G+ KSLADKFEYVMHG LYKIS+E SG N++   + SFGGL +
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 309 MLKGDAIKMERFELHEKYFLCMRKV 235
           MLKGD      FEL ++ FL MRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  159 bits (401), Expect = 8e-37
 Identities = 77/145 (53%), Positives = 109/145 (75%)
 Frame = -2

Query: 669 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 490
           M+  +FDDI  VD  D  GKK+DKVSRIEA SEQ +M +QLDVN E  P++ G+ FRMVL
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 489 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVAHLSFGGLQL 310
           A TL+ DG+ VT    +G++KSLADKF+YVM+G++YK+S+E SG +++ V + SFGGL +
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLM 120

Query: 309 MLKGDAIKMERFELHEKYFLCMRKV 235
           +LKGD   + + E++++ FL M+KV
Sbjct: 121 ILKGDPSNLNKLEVNKRLFLLMKKV 145


>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  156 bits (395), Expect = 4e-36
 Identities = 79/145 (54%), Positives = 105/145 (72%)
 Frame = -2

Query: 669 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 490
           M    F+DI KV  ++ DGKKYDKVSRIEARSE+L+M + LDVN+E+ P+  G+   MVL
Sbjct: 1   MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVL 60

Query: 489 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVAHLSFGGLQL 310
           + TLN DGS VTS   +  +KSLADKFEY+MHG  YK+SDE SG++L+   + SFGGLQ+
Sbjct: 61  SPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGSGSDLKVEVYASFGGLQM 120

Query: 309 MLKGDAIKMERFELHEKYFLCMRKV 235
           +LKGD I   +F + +  FL +RK+
Sbjct: 121 LLKGDPIHCAKFRVDQNMFLLLRKL 145


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  156 bits (395), Expect = 4e-36
 Identities = 80/145 (55%), Positives = 104/145 (71%)
 Frame = -2

Query: 669 MINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMVL 490
           M N  F DI KV ++D DGKK+DKVSRIEA+SEQL+M +QLDVN+E+ P+  G+ F M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 489 ADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKVAHLSFGGLQL 310
           A TL+ DG+  T    +   KSLADKFEYVMHG LYKIS+E SG N++ V ++SFGGL +
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 309 MLKGDAIKMERFELHEKYFLCMRKV 235
           ML GD     + +L ++ FL +RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  155 bits (392), Expect = 9e-36
 Identities = 81/147 (55%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
 Frame = -2

Query: 672 RMINFYFDDIIKVDRLDADGKKYDKVSRIEARSEQLNMQLQLDVNSELCPVRVGDTFRMV 493
           +M+   F+DI  V RLD DGKK+D+VSRIEARSEQ +M +QLDV +E+ P+R GD F MV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 492 LADTLNEDGSAVTSLLPKGKEKSLADKFEYVMHGLLYKISDEESGANLEKV-AHLSFGGL 316
           LA TLN DG+  T    +   K+LADKF+YVMHG LYKIS++ S     KV  + SFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 315 QLMLKGDAIKMERFELHEKYFLCMRKV 235
            +MLKGD      FEL ++ FL +RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396