BLASTX nr result

ID: Angelica22_contig00019684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019684
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent...   114   1e-23
gb|AFW88544.1| putative RNA helicase family protein [Zea mays]        113   2e-23
ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor...   113   2e-23
ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA h...   113   2e-23
emb|CBI36976.3| unnamed protein product [Vitis vinifera]              112   3e-23

>ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase
           [Arabidopsis thaliana]
           gi|3913425|sp|O22899.1|DHX15_ARATH RecName:
           Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase gi|2275203|gb|AAB63825.1| putative pre-mRNA
           splicing factor RNA helicase [Arabidopsis thaliana]
           gi|22135845|gb|AAM91108.1| At2g47250/T8I13.9
           [Arabidopsis thaliana] gi|28416499|gb|AAO42780.1|
           At2g47250/T8I13.9 [Arabidopsis thaliana]
           gi|330255726|gb|AEC10820.1| putative pre-mRNA-splicing
           factor ATP-dependent RNA helicase [Arabidopsis thaliana]
          Length = 729

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/60 (86%), Positives = 54/60 (90%)
 Frame = +1

Query: 289 FSVVAHLERTGHYLTAKDNQVDHLHPSNYLDYKPEWVIYNECVLTTRNFIRTVTDVRGEW 468
           F  VAHLERTGHYLT KDNQV HLHPSN LD+KPEWVIYNE VLTTRNFIRTVTD+RGEW
Sbjct: 629 FMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEW 688


>gb|AFW88544.1| putative RNA helicase family protein [Zea mays]
          Length = 129

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +1

Query: 289 FSVVAHLERTGHYLTAKDNQVDHLHPSNYLDYKPEWVIYNECVLTTRNFIRTVTDVRGEW 468
           F  VAHLERTGHYLT KDNQV HLHPSN +D+KPEWVIYNE VLTTRNFIRTVTD+RGEW
Sbjct: 31  FMQVAHLERTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEW 90


>ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Brachypodium distachyon]
          Length = 719

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +1

Query: 289 FSVVAHLERTGHYLTAKDNQVDHLHPSNYLDYKPEWVIYNECVLTTRNFIRTVTDVRGEW 468
           F  VAHLERTGHYLT KDNQV HLHPSN +D+KPEWVIYNE VLTTRNFIRTVTD+RGEW
Sbjct: 621 FMQVAHLERTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEW 680


>ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Zea mays]
           gi|195623176|gb|ACG33418.1| pre-mRNA-splicing factor
           ATP-dependent RNA helicase [Zea mays]
           gi|413955897|gb|AFW88546.1| putative RNA helicase family
           protein [Zea mays]
          Length = 722

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +1

Query: 289 FSVVAHLERTGHYLTAKDNQVDHLHPSNYLDYKPEWVIYNECVLTTRNFIRTVTDVRGEW 468
           F  VAHLERTGHYLT KDNQV HLHPSN +D+KPEWVIYNE VLTTRNFIRTVTD+RGEW
Sbjct: 624 FMQVAHLERTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGEW 683


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  112 bits (281), Expect = 3e-23
 Identities = 52/60 (86%), Positives = 54/60 (90%)
 Frame = +1

Query: 289 FSVVAHLERTGHYLTAKDNQVDHLHPSNYLDYKPEWVIYNECVLTTRNFIRTVTDVRGEW 468
           F  VAHLERTGHYLT KDNQV HLHPSN LD+KPEWVIYNE VLT+RNFIRTVTDVRGEW
Sbjct: 587 FMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEW 646


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