BLASTX nr result

ID: Angelica22_contig00019343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019343
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   150   1e-34
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   147   9e-34

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 7/140 (5%)
 Frame = -3

Query: 400 MSICANLNQPWNSIHSTTTLFPYCRTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSH 221
           M I A  NQPWNS H T  L P  +T  D+NQ+H+RLITTG I N  LTT++IL+F+SS 
Sbjct: 1   MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60

Query: 220 HTPLIHFARYVL-------NFRNDNDPFVWNLVLKCFSHGDEPIEAVVLFVLMLEKGVFF 62
           H PL+ FARY+          R  ++PF+WN ++K FSHG++P EA V+F LMLE GV  
Sbjct: 61  HKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCV 120

Query: 61  DKFSISLVLKACCRMGMGSE 2
           DKFS SLVLKAC R+G+  E
Sbjct: 121 DKFSFSLVLKACSRLGLIKE 140


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 7/140 (5%)
 Frame = -3

Query: 400 MSICANLNQPWNSIHSTTTLFPYCRTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSH 221
           M I A  NQPWNS H T  L P  +T  D+NQ+H+RLITTG I N  LTT++IL+F+SS 
Sbjct: 1   MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60

Query: 220 HTPLIHFARYVL-------NFRNDNDPFVWNLVLKCFSHGDEPIEAVVLFVLMLEKGVFF 62
           H PL+ FARY+          R  ++PF+WN ++K FSHG++P EA V+F LMLE GV  
Sbjct: 61  HKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCV 120

Query: 61  DKFSISLVLKACCRMGMGSE 2
           DKFS SLVLKAC R+G+  E
Sbjct: 121 DKFSFSLVLKACSRLGLIKE 140


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/142 (54%), Positives = 100/142 (70%), Gaps = 9/142 (6%)
 Frame = -3

Query: 400 MSICANLNQ-PWNSIHSTTTLFPYCRTQSDINQLHARLITTGLIKNSFLTTKLILSFTSS 224
           M ICA+ NQ PWNS  ST  L   C+T SDINQ+HAR+ITTG IKN+ LTTK+ILS +SS
Sbjct: 1   MLICASTNQQPWNSPLSTLILVRKCKTASDINQVHARMITTGFIKNTSLTTKIILSLSSS 60

Query: 223 HHTPLIHFARY--------VLNFRNDNDPFVWNLVLKCFSHGDEPIEAVVLFVLMLEKGV 68
            +  L  FARY        ++  +   DPF+WN V+K  SHG++P +A+++F LML+ GV
Sbjct: 61  PNVALHEFARYFFFTRHAYIIGAQEKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGV 120

Query: 67  FFDKFSISLVLKACCRMGMGSE 2
           F DKFS+SLVLKAC R+G+  E
Sbjct: 121 FVDKFSVSLVLKACSRLGLVKE 142


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 13/146 (8%)
 Frame = -3

Query: 400 MSICANLNQ-PWNSIHSTTTLFPYCRTQSDINQLHARLITTGLIKNSFLTTKLILSFTSS 224
           M +  NLNQ PWNS   T  L   C+  SDINQ+HARL+TTG IKN+FLTTK+ILSF++S
Sbjct: 1   MLLSGNLNQQPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTS 60

Query: 223 HHTPLIHFARYVLNFRN------------DNDPFVWNLVLKCFSHGDEPIEAVVLFVLML 80
            H PLI FAR++  FR+            + DPF+WN ++K +SHG +P EA+ L  LML
Sbjct: 61  LHAPLIEFARFIF-FRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLML 119

Query: 79  EKGVFFDKFSISLVLKACCRMGMGSE 2
           E G F DKF++SLVLKAC R+G+  E
Sbjct: 120 ENGAFADKFTLSLVLKACSRVGLVKE 145


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/133 (52%), Positives = 92/133 (69%), Gaps = 7/133 (5%)
 Frame = -3

Query: 379 NQPWNSIHSTTTLFPYCRTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSHHTPLIHF 200
           ++PWNS H T  L P  +T  D+NQ+H+RLITTG I N  LTT++IL+F+SS H PL+ F
Sbjct: 64  HKPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 123

Query: 199 ARYVL-------NFRNDNDPFVWNLVLKCFSHGDEPIEAVVLFVLMLEKGVFFDKFSISL 41
           ARY+          R  ++PF+WN ++K FSHG++P EA  +F LMLE GV  DKFS SL
Sbjct: 124 ARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSL 183

Query: 40  VLKACCRMGMGSE 2
           VLKAC R+G+  E
Sbjct: 184 VLKACSRLGLIKE 196


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