BLASTX nr result
ID: Angelica22_contig00019342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00019342
(251 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,... 102 4e-20
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat... 91 1e-16
ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ... 89 3e-16
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera] 88 8e-16
ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 87 2e-15
>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 832
Score = 102 bits (253), Expect = 4e-20
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
LISG Q + +M +F M KEG+ PN+FT SSV KCCS + E R GK +HGWI+ +G
Sbjct: 353 LISGFAQTRNFKMVSGLFRRMQKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSG 412
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
+ D LENS+LD YVKCG+FD
Sbjct: 413 IGFDIVLENSILDLYVKCGAFD 434
Score = 60.5 bits (145), Expect = 1e-07
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
+ISG V+ G AL F+ M E ++ +KFT +SV C+ +G+ +H I+ G
Sbjct: 594 MISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQIHAHILKIG 653
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
VD L +S++D Y KCGS +
Sbjct: 654 HKVDAHLGSSLIDMYAKCGSLN 675
>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 90.9 bits (224), Expect = 1e-16
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
LISG + GS M ++F EM +G PN++T SSV KCCS N ++GK VH W++ NG
Sbjct: 361 LISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNG 420
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
+ VD L NS+LD Y+KC F+
Sbjct: 421 IDVDVVLGNSILDLYLKCKVFE 442
>ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 755
Score = 89.4 bits (220), Expect = 3e-16
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = -1
Query: 251 LISGLVQV-GSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCN 75
LISG + GS + +F EM +G PN++T SSV KCCSR N + GK +H WI+ N
Sbjct: 104 LISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRN 163
Query: 74 GVFVDTALENSVLDFYVKCGSFD 6
GV D LENS+LD Y+KC F+
Sbjct: 164 GVGGDVVLENSILDLYLKCKEFE 186
>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 87.8 bits (216), Expect = 8e-16
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCS-RLNEFRMGKSVHGWIMCN 75
LISG ++G L +F +M +G+ PN+FT S V K CS +N+ R+GK +HGWI+ N
Sbjct: 68 LISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRN 127
Query: 74 GVFVDTALENSVLDFYVKCGSF 9
GV +D L NS+LD+YVKC F
Sbjct: 128 GVDLDAVLNNSILDYYVKCRCF 149
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
++SG VQ G AL F M + +KFT +SV C+ +G+ VHG+I G
Sbjct: 317 MVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 376
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
+D L +S++D YVKCGS +
Sbjct: 377 HGLDVFLGSSIIDMYVKCGSLN 398
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
+I GL++ G R+AL++ +M G NK TFS S L+ +GK +H ++ G
Sbjct: 201 MIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG 260
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
V D + NS++D Y KCG +
Sbjct: 261 VLDDGFVRNSLIDMYCKCGEME 282
>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 86.7 bits (213), Expect = 2e-15
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCS-RLNEFRMGKSVHGWIMCN 75
LISG ++G L +F +M +G+ PN+FT S V K CS +N+ R+GK +HGWI+ N
Sbjct: 358 LISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRN 417
Query: 74 GVFVDTALENSVLDFYVKCGSF 9
G+ +D L NS+LD+YVKC F
Sbjct: 418 GLDLDAVLNNSILDYYVKCRCF 439
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
++SG VQ G AL F M + +KFT +SV C+ +G+ VHG+I G
Sbjct: 607 MVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 666
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
+D L +S++D YVKCGS +
Sbjct: 667 HGLDVFLGSSIIDMYVKCGSLN 688
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = -1
Query: 251 LISGLVQVGSCRMALDMFVEMHKEGIVPNKFTFSSVFKCCSRLNEFRMGKSVHGWIMCNG 72
+I GL++ G R+AL++ +M G NK TFS S L+ +GK +H ++ G
Sbjct: 491 MIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG 550
Query: 71 VFVDTALENSVLDFYVKCGSFD 6
V D + NS++D Y KCG +
Sbjct: 551 VLDDGFVRNSLIDMYCKCGEME 572