BLASTX nr result

ID: Angelica22_contig00019167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00019167
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,...    87   1e-15
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_002339288.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281 IGYYCRKGLMEKAEALLDRA-KRDGKPLPQTWYYFATGYIGSGQLPKAVEAMKRAISKCR 105
           I  YCRKGL EKAEAL+++   + G PL  TW+Y A GY+   Q+PKAVEA+K+A+  C 
Sbjct: 367 IDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCP 426

Query: 104 RGWKQPSTDILIACLEYLKKNKDVKEVEEFIRSL 3
             WK PS + L  CLEYL+ N+DV+   EFIR L
Sbjct: 427 PNWK-PSKNTLATCLEYLEGNRDVEGAGEFIRFL 459


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -2

Query: 281 IGYYCRKGLMEKAEALLDRA-KRDGKPLPQTWYYFATGYIGSGQLPKAVEAMKRAISKCR 105
           I  Y RKGL+EKAE L+DRA  + G+P  +TWY+ ATGY+ +GQ  KAVEAMK+A+    
Sbjct: 379 IDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQTLKAVEAMKKAVVVSG 438

Query: 104 RGWKQPSTDILIACLEYLKKNKDVKEVEEFI 12
           R WK PS +IL  CL YLK   D+ ++  F+
Sbjct: 439 RMWK-PSNEILANCLGYLKVEGDLGKLTNFM 468


>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/90 (47%), Positives = 56/90 (62%)
 Frame = -2

Query: 272 YCRKGLMEKAEALLDRAKRDGKPLPQTWYYFATGYIGSGQLPKAVEAMKRAISKCRRGWK 93
           YCRKGL  KAEA   +A     P   TW   A  YIG  Q+ KAVE +K+AIS  R+GWK
Sbjct: 370 YCRKGLYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQNQMSKAVEMLKKAISVSRKGWK 429

Query: 92  QPSTDILIACLEYLKKNKDVKEVEEFIRSL 3
            P+   L  CL+YL++  DV+ +EE ++SL
Sbjct: 430 -PNPITLTTCLDYLEEQGDVEGIEEIVKSL 458


>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
           gi|449479168|ref|XP_004155524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 500

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = -2

Query: 272 YCRKGLMEKAEALLDRAKRDGKPLPQTWYYFATGYIGSGQLPKAVEAMKRAISKCRRGWK 93
           YCRKGL++KAE+++++A  +  P   TW   ATGY   G + KAVE +K+AI   R+ WK
Sbjct: 358 YCRKGLLDKAESVVNQAVVERTPFRSTWSILATGYAEYGHMSKAVEMLKKAILVGRQNWK 417

Query: 92  QPSTDILIACLEYLKKNKDVKEVEEFIR 9
               DIL ACL+YL+K  D + ++E +R
Sbjct: 418 PKQGDILEACLDYLEKQGDAETMDEIVR 445


>ref|XP_002339288.1| predicted protein [Populus trichocarpa] gi|222874812|gb|EEF11943.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -2

Query: 266 RKGLMEKAEALLDRA-KRDGKPLPQTWYYFATGYIGSGQLPKAVEAMKRAISKCRRGWKQ 90
           ++GL+EK E L+DRA    G P  +TWY+F TGY+ +GQ  KA+EAMK+ +    R WK 
Sbjct: 14  QEGLVEKVETLIDRAISIGGDPNAKTWYHFETGYLRNGQTLKAMEAMKKEVVVSGRRWK- 72

Query: 89  PSTDILIACLEYLKKNKDVKEVEEFIRSL 3
           PS + L  CLEYLK+  D+++V++F+  L
Sbjct: 73  PSNESLATCLEYLKEEGDLEKVKDFMELL 101


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