BLASTX nr result

ID: Angelica22_contig00018803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018803
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medi...    70   2e-10
ref|XP_002310108.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002306417.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-...    62   4e-08
ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-...    62   5e-08

>ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medicago truncatula]
           gi|355513751|gb|AES95374.1| Leucine-rich
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 55/148 (37%), Positives = 66/148 (44%), Gaps = 29/148 (19%)
 Frame = +3

Query: 6   HQVFDELIQRASECV-------------EFGTKGDFRGGVSVSSEGFSNDYRATG----- 131
           H +FDELIQRAS+CV             + G      G  S  S  FS +  ++      
Sbjct: 97  HSLFDELIQRASDCVSNPSGGSTGSNSRKIGYSNGSNGSASTVSTNFSKNLASSSGSGSR 156

Query: 132 ------VPSSS-----FLYEKQGVNGSSKLFTRDDSYVKMSKXXXXXXXXXXXXXXXXXX 278
                 VPSS+        EK      S+LFTRDDSYV  SK                  
Sbjct: 157 SGFDKQVPSSAGSSSLVRVEKDVSAKGSELFTRDDSYVSKSKSTLYHNGFGIEPNFSSK- 215

Query: 279 XPMIVDSTLKSLTSTGNDGEKLSLIKLA 362
            P I+DS+LKS  S G DG+KLSLIKLA
Sbjct: 216 -PQIMDSSLKSTASAGQDGDKLSLIKLA 242


>ref|XP_002310108.1| predicted protein [Populus trichocarpa] gi|222853011|gb|EEE90558.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 46/119 (38%), Positives = 59/119 (49%)
 Frame = +3

Query: 6   HQVFDELIQRASECVEFGTKGDFRGGVSVSSEGFSNDYRATGVPSSSFLYEKQGVNGSSK 185
           H +FDE IQRAS+C+   +          ++  FS D  +    S  +  EK+    S++
Sbjct: 92  HNLFDEFIQRASKCLSSPSSSSPPSVSGAAAGSFSIDGSSMATSSGLYYAEKEPTR-SAE 150

Query: 186 LFTRDDSYVKMSKXXXXXXXXXXXXXXXXXXXPMIVDSTLKSLTSTGNDGEKLSLIKLA 362
           LFTRDDSYVK +K                   P I DSTLK+      DGEKLSLIKLA
Sbjct: 151 LFTRDDSYVKKTK------SSFYSDGIGVSSTPHIADSTLKA----SQDGEKLSLIKLA 199


>ref|XP_002306417.1| predicted protein [Populus trichocarpa] gi|222855866|gb|EEE93413.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/119 (40%), Positives = 59/119 (49%)
 Frame = +3

Query: 6   HQVFDELIQRASECVEFGTKGDFRGGVSVSSEGFSNDYRATGVPSSSFLYEKQGVNGSSK 185
           H +FDE IQRAS+C+ +          S S    S    AT   +S   Y ++    S++
Sbjct: 92  HNLFDEFIQRASKCLSWPPPPP----TSSSPTSVSGSSMAT---TSGLYYAEKEPTRSAE 144

Query: 186 LFTRDDSYVKMSKXXXXXXXXXXXXXXXXXXXPMIVDSTLKSLTSTGNDGEKLSLIKLA 362
           LFTRDDSYVK +K                   P IVDSTLK+      DGEKLSLIKLA
Sbjct: 145 LFTRDDSYVKKAK------SSLYSDGIGVFSTPQIVDSTLKA----SQDGEKLSLIKLA 193


>ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 567

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
 Frame = +3

Query: 6   HQVFDELIQRASECVEFGTK----GDFRGGVSVSSEGFSNDYRATG-------VPSSSFL 152
           H +FDELIQRAS+CV   +      +  G  S  S   S +  + G        P+++  
Sbjct: 97  HSLFDELIQRASKCVASPSSKTSYSNANGSASSVSTSLSKNSVSVGGFDKPPLAPAATTS 156

Query: 153 YEKQGVNGSSKLFTRDDSYVKMSKXXXXXXXXXXXXXXXXXXXPMIVDSTLKSLTSTGND 332
            +       S+L TRDDSYVK SK                     I+DS+LK  T+ G D
Sbjct: 157 RKFHAEKERSELVTRDDSYVKKSKSSFYSNGYGIEPTIPSKSS--ILDSSLKPTTTAGQD 214

Query: 333 GEKLSLIKLA 362
           G+KLSLIKLA
Sbjct: 215 GDKLSLIKLA 224


>ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
           gi|296082577|emb|CBI21582.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = +3

Query: 6   HQVFDELIQRASECVEFGTKGDFRGGVSVSSEGFSNDYRATGVPSSSFLYEKQGVNGSSK 185
           H +FD+LI+RAS C+   +        S S    S    +    +S+  +       + K
Sbjct: 98  HLMFDDLIERASRCLPSTSISHHSSSSSSSPSTLSKSSESAPASASATAFNSTVFKETPK 157

Query: 186 ---LFTRDDSYVKMSKXXXXXXXXXXXXXXXXXXXPMIVDSTLKSLTSTGNDGEKLSLIK 356
              LFTRDDSYVK +K                   P I+DS+LKS +++G D EKLSLIK
Sbjct: 158 VTDLFTRDDSYVKKTKSTFYVDGIGASPANLST--PQILDSSLKSPSTSGQDSEKLSLIK 215

Query: 357 LA 362
           LA
Sbjct: 216 LA 217


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