BLASTX nr result

ID: Angelica22_contig00018755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018755
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   176   5e-42
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   167   2e-39
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]   159   6e-37
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   139   5e-31
ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-28

>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  176 bits (446), Expect = 5e-42
 Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
 Frame = +1

Query: 253 NEGNTFRGGGGVSKDDYFVTVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCC 432
           N  +   G    SKDDYF  +HHIS++VRRD YMERTLNK+ IS + NSELV+RVLR C 
Sbjct: 25  NSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNL-NSELVFRVLRACS 83

Query: 433 HNGSESFRFFNWARTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAHQMKTQDXXXXXX 612
           ++G+ESFRFFNWA + +P Y P            ARTR + TMWKV  QMKTQ+      
Sbjct: 84  NSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPE 143

Query: 613 XXXXXXEQYGKHGLIDQAVELFNRL-KNFNCPQTTEIYNSLLYALCE 750
                 ++YGK GL+D AV +FN+  K+ +CPQT E+YN+LL+ALCE
Sbjct: 144 TISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCE 190


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  167 bits (424), Expect = 2e-39
 Identities = 86/154 (55%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
 Frame = +1

Query: 292 KDDYFVTVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGSESFRFFNWA 471
           KDDYF  VHHIS +VRRD Y+ERTLNK+ IS  V S+LVYRVLR+C ++G+ES RFFNWA
Sbjct: 43  KDDYFAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWA 100

Query: 472 RTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAHQMKTQDXXXXXXXXXXXXEQYGKHG 651
           R+ H  Y P            ART+ ++ MWK+AHQM+T              E++GKHG
Sbjct: 101 RS-HLSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHG 155

Query: 652 LIDQAVELFNRLKN-FNCPQTTEIYNSLLYALCE 750
           L+DQAVE+FN+ K+  NCPQT E+YNSLL+ALCE
Sbjct: 156 LVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCE 189


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score =  159 bits (402), Expect = 6e-37
 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = +1

Query: 304 FVTVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGSESFRFFNWARTQH 483
           F  VHHIS +VRRD Y+ERTLNK+ IS  V S+LVYRVLR+C ++G+ES RFFNWAR+ H
Sbjct: 4   FAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-H 60

Query: 484 PQYDPXXXXXXXXXXXXARTRCWETMWKVAHQMKTQDXXXXXXXXXXXXEQYGKHGLIDQ 663
             Y P            ART+ ++ MWK+AHQM+T              E++GKHGL+DQ
Sbjct: 61  XSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQ 116

Query: 664 AVELFNRLKN-FNCPQTTEIYNSLLYALCE 750
           AVE+FN+ K+  NCPQT E+YNSLL+ALCE
Sbjct: 117 AVEVFNKAKSALNCPQTIEVYNSLLFALCE 146


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  139 bits (351), Expect = 5e-31
 Identities = 83/205 (40%), Positives = 114/205 (55%), Gaps = 2/205 (0%)
 Frame = +1

Query: 142 MLIRARLYFYERILNVTKSNAVVSRSFGTSMKPVLKDNEGNTFRGGGGVSKDDYFVTVHH 321
           ML R +L+       + K+ A V+      +K +   +  NT        KD YF  +HH
Sbjct: 1   MLRRTKLFI------LPKTTATVTLQPLRHLKVLASTSTNNT--------KDAYFALIHH 46

Query: 322 ISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGSESFRFFNWARTQHPQYDPX 501
           I+N+VRRD Y ERTLNK+  +  V SELV+RVLR C  + +ES RFFNW+R     Y P 
Sbjct: 47  ITNIVRRDFYPERTLNKL--NAPVTSELVFRVLRACSRSPTESLRFFNWSRAY---YTPT 101

Query: 502 XXXXXXXXXXXARTRCWETMWKVAHQMKTQDXXXXXXXXXXXX--EQYGKHGLIDQAVEL 675
                      A+++ + +MWK+  QMK Q+              E+YG+ GLIDQAVE+
Sbjct: 102 SIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEV 161

Query: 676 FNRLKNFNCPQTTEIYNSLLYALCE 750
           FN+  + NC Q  +IYNSLL+ALCE
Sbjct: 162 FNQCNSLNCEQNVDIYNSLLFALCE 186


>ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Glycine max]
          Length = 450

 Score =  130 bits (326), Expect = 4e-28
 Identities = 68/155 (43%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
 Frame = +1

Query: 289 SKDDYFVTVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGSESFRFFNW 468
           S+D+YF  +HH+SN+VRRD Y+ERTLNK+ I+  V  ELV+RVLR C +N +ES RFFNW
Sbjct: 34  SRDEYFAVIHHVSNIVRRDFYLERTLNKLRIT--VTPELVFRVLRACSNNPTESLRFFNW 91

Query: 469 ARTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAHQMKTQD-XXXXXXXXXXXXEQYGK 645
           ART HP Y P            AR   +++MW +  Q+                 E YG 
Sbjct: 92  ART-HPSYSPTSLEFEQIVTTLARANTYQSMWALIRQVTLHHRLSLSPSAVASVIEAYGD 150

Query: 646 HGLIDQAVELFNRLK-NFNCPQTTEIYNSLLYALC 747
           +  +DQ+V++FN+     NCPQT  +YN+LL +LC
Sbjct: 151 NRHVDQSVQVFNKSPLLLNCPQTLPLYNALLRSLC 185


Top