BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018620
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37872.1| unknown [Lotus japonicus]                              549   e-154
ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   548   e-153
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   543   e-152
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   543   e-152
ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis t...   538   e-150

>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  549 bits (1414), Expect = e-154
 Identities = 274/354 (77%), Positives = 294/354 (83%)
 Frame = -1

Query: 1399 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 1220
            MLWVDKYRPK LD+V+VH DVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 1219 ASXXXXXXXXXXXXVDAGXXXXXXXXXXXXXTHHVELNPSDAGFQDRYIVQEIIKEMAKN 1040
             +            VDAG              HH+E++PSDAGFQDRY+VQEIIKEMAKN
Sbjct: 61   TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120

Query: 1039 RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 860
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 859  CLNVRINAPKEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQY 680
            CLN+RINAP EE+IVEV+EFIGKKEGLQ+P GFAARIAEKSNR+LRRAILSFETCRVQQY
Sbjct: 181  CLNIRINAPSEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQY 240

Query: 679  PFTNNQLIPAMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXX 500
            PFTN Q IP MDWE Y+ EIASDIMKEQ+PKRLFQVRGK+YELL NCIPP          
Sbjct: 241  PFTNRQTIPPMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFE 300

Query: 499  XXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG 338
                       EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK FLI+TFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 354


>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
            gi|296089274|emb|CBI39046.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  548 bits (1413), Expect = e-153
 Identities = 279/354 (78%), Positives = 291/354 (82%)
 Frame = -1

Query: 1399 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 1220
            MLWVDKYRPK LD +IVH DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMA+LRQMFG
Sbjct: 1    MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60

Query: 1219 ASXXXXXXXXXXXXVDAGXXXXXXXXXXXXXTHHVELNPSDAGFQDRYIVQEIIKEMAKN 1040
             S            +DAG             THH+ELNP DAGFQDRYIVQEIIKEMAKN
Sbjct: 61   PSADKVKVENKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKN 120

Query: 1039 RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 860
            RPIDTKGKKGF+VLVLNEVD+LSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
Sbjct: 121  RPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180

Query: 859  CLNVRINAPKEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQY 680
            CLN+RINAP EE+I +VLEFI KKEGLQLP GFA RIAEKSNRSLRRAILSFETCRVQQY
Sbjct: 181  CLNIRINAPTEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 679  PFTNNQLIPAMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXX 500
            PFTNNQ +P MDWE YV EIASDIMKEQSPKRLFQVRGK+YELL NCIPP          
Sbjct: 241  PFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLE 300

Query: 499  XXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG 338
                       EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLI+TFG
Sbjct: 301  LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
            gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  543 bits (1399), Expect = e-152
 Identities = 275/354 (77%), Positives = 292/354 (82%)
 Frame = -1

Query: 1399 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 1220
            MLWVDKYRPK LD+V+VH D+A+NLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 1219 ASXXXXXXXXXXXXVDAGXXXXXXXXXXXXXTHHVELNPSDAGFQDRYIVQEIIKEMAKN 1040
                          VDAG              +H+E++PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 1039 RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 860
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 859  CLNVRINAPKEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQY 680
            CLNVRINAP EE+IVEVLEFIGKKEGLQLP GFAARI EKSNR+LRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY 240

Query: 679  PFTNNQLIPAMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXX 500
            PFTN Q IP MDWE Y+ EIASDIMKEQSPKRLFQVRGK+YELL NCIPP          
Sbjct: 241  PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300

Query: 499  XXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG 338
                       EVCHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYK FLISTFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG 354


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  543 bits (1399), Expect = e-152
 Identities = 277/354 (78%), Positives = 297/354 (83%)
 Frame = -1

Query: 1399 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 1220
            MLWVDKYRPK LD+VIVHQ++A+NLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQ+FG
Sbjct: 1    MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60

Query: 1219 ASXXXXXXXXXXXXVDAGXXXXXXXXXXXXXTHHVELNPSDAGFQDRYIVQEIIKEMAKN 1040
             S            +DAG             T+HVEL+PSD GFQDRYIVQEIIKEMAKN
Sbjct: 61   TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN 120

Query: 1039 RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 860
            RPIDTKGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEA+RSR
Sbjct: 121  RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR 180

Query: 859  CLNVRINAPKEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQY 680
            CLNVRINAPKEE+IV+VLEFIGKKEGLQLP GFAARIA+KSNRSLRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQY 240

Query: 679  PFTNNQLIPAMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXX 500
            PF++NQ IP MDWE YV EI SDIM+EQSPKRLFQVRGK+YELL NCIPP          
Sbjct: 241  PFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSE 299

Query: 499  XXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG 338
                       EVCHWAAYYEHRMR+GQKAIFH+EAFVAKFMSIYK FLI+TFG
Sbjct: 300  LLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFVAKFMSIYKAFLIATFG 353


>ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis thaliana]
            gi|18389268|gb|AAL67077.1| putative replication factor C
            [Arabidopsis thaliana] gi|20259637|gb|AAM14175.1|
            putative replication factor C [Arabidopsis thaliana]
            gi|332006337|gb|AED93720.1| replication factor C subunit
            3/5 [Arabidopsis thaliana]
          Length = 354

 Score =  538 bits (1385), Expect = e-150
 Identities = 274/354 (77%), Positives = 293/354 (82%)
 Frame = -1

Query: 1399 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 1220
            MLWVDKYRPK+LDKVIVH+D+AQ LKKLV+EQDCPHLLFYGPSGSGKKTLIMALL+Q++G
Sbjct: 1    MLWVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 1219 ASXXXXXXXXXXXXVDAGXXXXXXXXXXXXXTHHVELNPSDAGFQDRYIVQEIIKEMAKN 1040
            AS            VDAG             T+HVEL PSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61   ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 1039 RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 860
            RPIDTKGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYS+SCRLILCCNSSSKVTEA++SR
Sbjct: 121  RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 859  CLNVRINAPKEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQY 680
            CLNVRINAP +EEIV+VLEF+ KKE LQLP GFAARIAEKSNRSLRRAILS ETCRVQ Y
Sbjct: 181  CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY 240

Query: 679  PFTNNQLIPAMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXX 500
            PFT NQ+I  MDWE YV EIA+D+MKEQSPK+LFQVRGKVYELL NCIPP          
Sbjct: 241  PFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHE 300

Query: 499  XXXXXXXXXXXEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG 338
                       EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLISTFG
Sbjct: 301  LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 354