BLASTX nr result

ID: Angelica22_contig00018589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018589
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    82   2e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    75   7e-12
gb|AAX95862.1| retrotransposon protein, putative, unclassified [...    74   1e-11
ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group] g...    74   1e-11
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    72   4e-11

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 82.0 bits (201), Expect(2) = 2e-15
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = -3

Query: 233  PFQKLCARYYGPYTILQKVGKVAYKMDLPPSSKIHPVFHVSQLKKVVG 90
            PF+KL  R+YGP+T+LQ++G  AYK+ LPPSSKIHPVFHVS LKKVVG
Sbjct: 1473 PFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVG 1520



 Score = 24.6 bits (52), Expect(2) = 2e-15
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 82   KQVLGVRNTTTGLPTDL*VLIKWEGMP 2
            +++L VR    G  T    LIKW+G+P
Sbjct: 1543 EELLDVRQIRQGKQTFTECLIKWKGLP 1569


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 30/46 (65%), Positives = 40/46 (86%)
 Frame = -3

Query: 227  QKLCARYYGPYTILQKVGKVAYKMDLPPSSKIHPVFHVSQLKKVVG 90
            +KL  RYYGP+ +L+++G VAY++DLPP SKIHPVFH+SQL+K VG
Sbjct: 1244 EKLAPRYYGPFPVLKRIGTVAYELDLPPHSKIHPVFHISQLRKAVG 1289


>gb|AAX95862.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77549399|gb|ABA92196.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 332

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -3

Query: 227 QKLCARYYGPYTILQKVGKVAYKMDLPPSSKIHPVFHVSQLKKVV 93
           QKLC RY+GPY IL+++G+VAYK+DLPP S++HPV HVS LKK +
Sbjct: 229 QKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVVHVSLLKKAI 273


>ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group]
           gi|113644753|dbj|BAF27894.1| Os11g0224300, partial
           [Oryza sativa Japonica Group]
          Length = 383

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -3

Query: 227 QKLCARYYGPYTILQKVGKVAYKMDLPPSSKIHPVFHVSQLKKVV 93
           QKLC RY+GPY IL+++G+VAYK+DLPP S++HPV HVS LKK +
Sbjct: 280 QKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVVHVSLLKKAI 324


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = -3

Query: 227  QKLCARYYGPYTILQKVGKVAYKMDLPPSSKIHPVFHVSQLKKVVGQ 87
            QKL +R+YGPY I Q++GKVAYK++LP  SKIHP+FHVS LKK +G+
Sbjct: 1240 QKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKKLGE 1286


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