BLASTX nr result

ID: Angelica22_contig00018549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018549
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    96   1e-17
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...    69   3e-09
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...    67   8e-09
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    66   2e-08

>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  100 bits (250), Expect = 5e-19
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
 Frame = -1

Query: 1065 EMDAARIALPSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPA 886
            E D A +AL S+  ++  E C L L D   CKSILNE+AVK+N EKP Y T  S GL P 
Sbjct: 195  EQDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPV 254

Query: 885  F-SSVTLNGKQYVGNEGRNKKESQXXXXXXXXXXXLGTCLYIDSDARTVISKIITNSKKR 709
            F S++  +G  Y G+ GRNKKE++           +G     +S +  ++ +II  SK +
Sbjct: 255  FISTLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIG-----NSGSSKILYEII-KSKSK 308

Query: 708  LTAAKEKDKHPHNTQNEVKPVRIPTESNFGTSASKGNELKVVVLNENMPRASILDHSTGN 529
            L AA ++ K P ++Q  + PV +       T+  +  E+   V+ +  P        + N
Sbjct: 309  LYAALDRVKDPSHSQPNIVPVAVKVGHCSETTVDQEQEVSTAVVRDAAP-------VSAN 361

Query: 528  SARVSAKPISLDESRSSELEPSLVGALEANCSPIISLPPSS 406
               V+ K     E+ + + E  +  A+  +  P+ ++PP++
Sbjct: 362  IVPVAVKVGHCSET-TVDQEQEVSTAVVRDAVPVSAIPPAA 401


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
            vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
            product [Vitis vinifera]
          Length = 333

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
 Frame = -1

Query: 1065 EMDAARIALPSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPA 886
            E D AR+AL  +  +I  E C L  ED   CKSILNE+AVK+N EKP Y T   +GL P 
Sbjct: 78   EQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPV 137

Query: 885  F-SSVTLNGKQYVGNEGRNKKESQXXXXXXXXXXXLGTCLYIDSDARTVISKIITNSKKR 709
            F SS+  NG  Y G+ GRNKKE++           LG     +S + T++S+II  SK +
Sbjct: 138  FVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILG-----NSGSGTLLSEII-KSKVK 191

Query: 708  LTAAKEKDKHPHNTQNEVKPVRIPTESNFGTSASKGNELKV 586
            L AA  + K P      + P+ + +    G    KG E++V
Sbjct: 192  LYAALHRVKDPSYIHTGILPIGLTS----GIPPCKGKEVEV 228


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 5/222 (2%)
 Frame = -1

Query: 1065 EMDAARIALPSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPA 886
            E DAAR+A   +  +   +   L  ED+ +CKSIL+EY  K+  E+PIY TK + G    
Sbjct: 133  EQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAF 192

Query: 885  F-SSVTLNGKQYVGNEGRNKKESQXXXXXXXXXXXLGTCLYIDSDARTVISK----IITN 721
            F S++  +G  Y  + GR KKE++               L +  DA    S+     I  
Sbjct: 193  FQSTLVFDGVVYTSDLGRTKKEAE-------QLAARAAILSLHEDATNPKSQKALGDIIA 245

Query: 720  SKKRLTAAKEKDKHPHNTQNEVKPVRIPTESNFGTSASKGNELKVVVLNENMPRASILDH 541
            SK R  A  +K K  + +Q + K +   T      + ++G ELK  VL+  M   +I + 
Sbjct: 246  SKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCGAISE- 304

Query: 540  STGNSARVSAKPISLDESRSSELEPSLVGALEANCSPIISLP 415
                     A P       +S+ +P          SP++ LP
Sbjct: 305  ---------ACP-------TSQFQPEFSATKPDGSSPLMRLP 330


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
 Frame = -1

Query: 1065 EMDAARIALPSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPA 886
            E DAAR+A   +  +   +   L  ED+ +CKSIL+EY  K+  E+PIY TK + G    
Sbjct: 133  EQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAF 192

Query: 885  F-SSVTLNGKQYVGNEGRNKKESQXXXXXXXXXXXLGTCLYIDSDARTVISK----IITN 721
            F S++  +G  Y  + GR KKE++               L +  DA    S+     I  
Sbjct: 193  FQSTLVFDGVVYTSDLGRTKKEAE-------QLAARAAILSLHEDATNPKSQKALGDIIA 245

Query: 720  SKKRLTAAKEKDKHPHNTQNEVKPVRIPTESNFGTSASKGNELKVVVLN 574
            SK R  A  +K K  + +Q + K +   T      + ++G ELK  VL+
Sbjct: 246  SKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLD 294


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223527827|gb|EEF29925.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 289

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1065 EMDAARIALPSLPLQIDAE--NCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLP 892
            E D A++AL S+  +I  E  +     ED   CKSILNEYAVK+  E P Y T    GL 
Sbjct: 69   EQDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLF 128

Query: 891  PAF-SSVTLNGKQYVGNEGRNKKESQXXXXXXXXXXXLGTCLYIDSDARTVISKIITNSK 715
            P F SS   NG  Y G+ GR KKE++               L  + ++  +ISK   + +
Sbjct: 129  PIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAV-----LSLLRNVESGEIISKFFKSKR 183

Query: 714  KRLTAAKEKDKHPHNTQNEVKPV 646
            K      + D    + QN   PV
Sbjct: 184  KLYVGFHKSDS--QDAQNSNMPV 204


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