BLASTX nr result

ID: Angelica22_contig00018297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00018297
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...    72   5e-11
ref|NP_191425.1| ribosomal protein L1p/L10e family protein [Arab...    72   6e-11
ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...    69   3e-10

>ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|222868927|gb|EEF06058.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = +2

Query: 110 TTKPTMSTTRVTPETISTAVSALLKWKQSKSASEKAQLLPQEEFFYLTLTLKHIPQKG-C 286
           TT P   ++ V+P+T+  AV+ALLKW+ S   ++K QLL Q+EFFYL LTLK IPQKG  
Sbjct: 2   TTLPPPPSSGVSPKTVEKAVNALLKWRSSTLNTQKPQLLEQDEFFYLILTLKKIPQKGVS 61

Query: 287 RVNPYKIPLP 316
           R+N +KIPLP
Sbjct: 62  RINAHKIPLP 71


>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 408

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +2

Query: 125 MSTTRVTPETISTAVSALLKWKQSKSASEKAQLLPQ-EEFFYLTLTLKHIPQKGCRVNPY 301
           M++  V+PET+S AV ALL+W++S+S  +K +LL + EEF YL LTLK IP K  RVNP+
Sbjct: 1   MASENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSKS-RVNPH 59

Query: 302 KIPLP 316
           KIPLP
Sbjct: 60  KIPLP 64


>ref|NP_191425.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
           gi|7630061|emb|CAB88283.1| putative protein [Arabidopsis
           thaliana] gi|17979349|gb|AAL49900.1| unknown protein
           [Arabidopsis thaliana] gi|332646291|gb|AEE79812.1|
           ribosomal protein L1p/L10e family protein [Arabidopsis
           thaliana]
          Length = 446

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +2

Query: 74  SPTYTHKPQPIHTTKPTMSTTRVTPETISTAVSALLKWKQSKSASEKAQLLPQEEFFYLT 253
           SP    + Q +H ++    T+RV+P+T+ +A++ L+ W+  KS +EK QLL ++E  YL 
Sbjct: 6   SPPPPQEQQLVHASQ----TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLF 61

Query: 254 LTLKHIPQKGCRVNPYKIPLP 316
           +TLK IPQK  R N Y+IPLP
Sbjct: 62  VTLKKIPQK-TRTNAYRIPLP 81


>ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|222859475|gb|EEE97022.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = +2

Query: 143 TPETISTAVSALLKWKQSKSASEKAQLLPQEEFFYLTLTLKHIPQKG-CRVNPYKIPLP 316
           +P+T+  AV+ALLKW+ SK  ++K QLL  +EF YL LTLK IP KG  R+N +KIPLP
Sbjct: 10  SPKTVEKAVNALLKWRSSKLNTQKPQLLEHDEFVYLILTLKKIPHKGVSRINAHKIPLP 68


>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
           protein 1-like [Cucumis sativus]
          Length = 364

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = +2

Query: 131 TTRVTPETISTAVSALLKWKQSKSASEKAQLLPQEEFFYLTLTLKHIPQKGCRVNPYKIP 310
           TT+V  ET + AV +LL+W+ SK   EK QL  QE+F YL +TLK IP KG R NPYKIP
Sbjct: 9   TTKVRRETAAKAVESLLQWRNSKR--EKPQLFDQEDFLYLIVTLKKIPPKG-RTNPYKIP 65

Query: 311 LP 316
           LP
Sbjct: 66  LP 67


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