BLASTX nr result

ID: Angelica22_contig00017900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017900
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]    44   4e-06
ref|XP_003627241.1| Tir-nbs-lrr resistance protein [Medicago tru...    48   1e-05

>emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]
          Length = 548

 Score = 43.9 bits (102), Expect(2) = 4e-06
 Identities = 24/71 (33%), Positives = 44/71 (61%)
 Frame = +1

Query: 16  EARKCQRFQEGLKLQIREKVSLLELEQFDKLVGKARIVERESEACTQFFNNNKRGSDFKS 195
           E  K  +FQ+GLK  ++ K+S+L+L  + ++V +A IVE+++E   Q+    ++ +  +S
Sbjct: 256 EEEKALKFQDGLKPYLKNKISILKLGVYSEVVDRALIVEKDNEELHQYREQQRKRN--RS 313

Query: 196 SGSLRTKGRNQ 228
            G+    GRNQ
Sbjct: 314 DGA---HGRNQ 321



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 285 CKKCGLKHVGDICFRTEGLCYNYGKR 362
           C  CG KH G  C+R    C+ YGK+
Sbjct: 334 CPTCGKKHGGRPCYREIEACFGYGKQ 359


>ref|XP_003627241.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
           gi|355521263|gb|AET01717.1| Tir-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 640

 Score = 47.8 bits (112), Expect(2) = 1e-05
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +1

Query: 19  ARKCQRFQEGLKLQIREKVSLLELEQFDKLVGKARIVERESEACTQFFNNNKRGSDFKSS 198
           A  C RFQEGLK +I++ V  L ++QF  LV K R +E          NNN  G   +SS
Sbjct: 501 AYMCHRFQEGLKDEIQDMVMPLGIQQFHPLVEKCREIEAMKNKRLARGNNNNCGGPTRSS 560

Query: 199 GSLRTKGRN--QEFQKKERFKGN*KN 270
              R +G N  + ++     KG+  N
Sbjct: 561 NQNRGRGGNGKKPYEDSREPKGDYNN 586



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 362 GHMSRQCPEARRTLCFSYGNEGHISRDC 445
           GH + +C  A+  LC+     GH++RDC
Sbjct: 612 GHYADKCI-AKSDLCYRCREPGHLARDC 638


Top