BLASTX nr result

ID: Angelica22_contig00017830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017830
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   181   7e-44
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   180   9e-44
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   180   9e-44
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              180   9e-44
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   179   3e-43

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  181 bits (458), Expect = 7e-44
 Identities = 92/136 (67%), Positives = 100/136 (73%)
 Frame = +3

Query: 69  NPKAFAFTSTVKAKRLQSRATEKEQRRLHLPVVNRNIXXXXXXXXXXXXXXXXXKSLVIK 248
           NPKAFAF S+VKAKRLQSRA EKEQRRLH+P ++R+                  KSL+IK
Sbjct: 45  NPKAFAFNSSVKAKRLQSRAVEKEQRRLHVPTIDRSYGEPAPYVVLVHGPPQVGKSLLIK 104

Query: 249 SLVKHYTKHNLPEVRGPITIVTGKQRRVQFVECPNDINGMIXXXXXXXXXXXXXXGSYGF 428
           SLVKHYTKHNLPEVRGPITIV+GKQRRVQFVECPNDINGMI              GSYGF
Sbjct: 105 SLVKHYTKHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGF 164

Query: 429 EMETFEFLNIMQNHGF 476
           EMETFEFLNI+Q HGF
Sbjct: 165 EMETFEFLNILQVHGF 180


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/137 (66%), Positives = 101/137 (73%)
 Frame = +3

Query: 66  HNPKAFAFTSTVKAKRLQSRATEKEQRRLHLPVVNRNIXXXXXXXXXXXXXXXXXKSLVI 245
           HNPKAFAF+S+VKAKRLQSRATEKEQRRLH+P ++R+                  KSL+I
Sbjct: 44  HNPKAFAFSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLI 103

Query: 246 KSLVKHYTKHNLPEVRGPITIVTGKQRRVQFVECPNDINGMIXXXXXXXXXXXXXXGSYG 425
           KSLVKHYTKHNL EVRGPITIV+GK RR+QFVECPNDINGMI              GSYG
Sbjct: 104 KSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYG 163

Query: 426 FEMETFEFLNIMQNHGF 476
           FEMETFEFLNI+Q HGF
Sbjct: 164 FEMETFEFLNILQVHGF 180


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/136 (67%), Positives = 101/136 (74%)
 Frame = +3

Query: 69  NPKAFAFTSTVKAKRLQSRATEKEQRRLHLPVVNRNIXXXXXXXXXXXXXXXXXKSLVIK 248
           NPKAFAFTS+ KAKRLQSRA EKEQRRLH+PV++R+                  KSL+IK
Sbjct: 49  NPKAFAFTSSNKAKRLQSRAVEKEQRRLHVPVIDRSYDEPAPYVVVVQGPPQVGKSLLIK 108

Query: 249 SLVKHYTKHNLPEVRGPITIVTGKQRRVQFVECPNDINGMIXXXXXXXXXXXXXXGSYGF 428
           SLVKHYTKHNLP+VRGPITIV+GKQRRVQFVECPNDINGMI              GSYGF
Sbjct: 109 SLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGF 168

Query: 429 EMETFEFLNIMQNHGF 476
           EMETFEFLNI+Q HGF
Sbjct: 169 EMETFEFLNILQVHGF 184


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/137 (66%), Positives = 101/137 (73%)
 Frame = +3

Query: 66  HNPKAFAFTSTVKAKRLQSRATEKEQRRLHLPVVNRNIXXXXXXXXXXXXXXXXXKSLVI 245
           HNPKAFAF+S+VKAKRLQSRATEKEQRRLH+P ++R+                  KSL+I
Sbjct: 44  HNPKAFAFSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLI 103

Query: 246 KSLVKHYTKHNLPEVRGPITIVTGKQRRVQFVECPNDINGMIXXXXXXXXXXXXXXGSYG 425
           KSLVKHYTKHNL EVRGPITIV+GK RR+QFVECPNDINGMI              GSYG
Sbjct: 104 KSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYG 163

Query: 426 FEMETFEFLNIMQNHGF 476
           FEMETFEFLNI+Q HGF
Sbjct: 164 FEMETFEFLNILQVHGF 180


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/136 (66%), Positives = 101/136 (74%)
 Frame = +3

Query: 69  NPKAFAFTSTVKAKRLQSRATEKEQRRLHLPVVNRNIXXXXXXXXXXXXXXXXXKSLVIK 248
           NPKAFAF+S+ KAKRLQSRA EKEQRRLH+PV++R+                  KSL+IK
Sbjct: 47  NPKAFAFSSSNKAKRLQSRAVEKEQRRLHVPVIDRSYGEPAPYVVVVQGPPQVGKSLLIK 106

Query: 249 SLVKHYTKHNLPEVRGPITIVTGKQRRVQFVECPNDINGMIXXXXXXXXXXXXXXGSYGF 428
           SLVKHYTKHNLP+VRGPITIV+GKQRRVQFVECPNDINGMI              GSYGF
Sbjct: 107 SLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGF 166

Query: 429 EMETFEFLNIMQNHGF 476
           EMETFEFLNI+Q HGF
Sbjct: 167 EMETFEFLNILQVHGF 182


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