BLASTX nr result

ID: Angelica22_contig00017705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017705
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   178   7e-43
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   175   4e-42
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|2...   171   8e-41
ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   168   7e-40

>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  178 bits (451), Expect = 7e-43
 Identities = 82/100 (82%), Positives = 94/100 (94%)
 Frame = -2

Query: 590 TGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIETTPY 411
           TGAVDLI+H+KL+PHHEFFCKRSLPLSISDTHYLHNVVGD+EIRKG+GMQLDQLI+ T Y
Sbjct: 16  TGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDGMQLDQLIQNTSY 75

Query: 410 SRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 291
           SR+SN RIQPFD+DVLRE+FQL+ET  +DLP +EKGTPTI
Sbjct: 76  SRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTI 115


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  175 bits (444), Expect = 4e-42
 Identities = 82/100 (82%), Positives = 92/100 (92%)
 Frame = -2

Query: 590 TGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIETTPY 411
           TGAVDLI+HYKLLPHH+FFCK+SLPLSISDTHYLHNVVGDTEIRKGEGMQL+QLI+ T Y
Sbjct: 16  TGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSY 75

Query: 410 SRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 291
            RE+N RIQPFD D+L E+FQLRETG VDLP++EKG PTI
Sbjct: 76  PRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTI 115


>ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|222837730|gb|EEE76095.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  171 bits (433), Expect = 8e-41
 Identities = 81/100 (81%), Positives = 93/100 (93%)
 Frame = -2

Query: 590 TGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIETTPY 411
           TGAVDLI+H+KLLPHHEFFCKRSLPLSI+DTHYLHNVVGDTEIRKGEGMQLDQLI+ T  
Sbjct: 15  TGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLIQNT-- 72

Query: 410 SRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 291
           SR+SN  I+PFD+DVLRE+FQL+ET  +DLP++EKGTPTI
Sbjct: 73  SRDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKGTPTI 112


>ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|222849267|gb|EEE86814.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/100 (81%), Positives = 94/100 (94%)
 Frame = -2

Query: 590 TGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIETTPY 411
           TGAVDLI+HYKLLPH+E+FCKRSLPLSI+DTHYLHNVVGDTEIRKGEGMQLDQLI+ T  
Sbjct: 15  TGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLIQNT-- 72

Query: 410 SRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 291
           SR+SN RIQPFD++VLRE+FQL+ET  +DLP++EKGTPTI
Sbjct: 73  SRDSNARIQPFDLNVLREAFQLKETTPIDLPSAEKGTPTI 112


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  168 bits (425), Expect = 7e-40
 Identities = 77/100 (77%), Positives = 92/100 (92%)
 Frame = -2

Query: 590 TGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIETTPY 411
           TGAVDLI+H+KLLPH+EFFCKRSLP+SI+DTHYLHNVVGDTEIRKG+GMQL+QLI+ T  
Sbjct: 16  TGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDGMQLEQLIQNTSS 75

Query: 410 SRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTI 291
            R++N RIQPFD+DVL+E+FQLRET  +DLPA+EKG PTI
Sbjct: 76  FRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTI 115


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