BLASTX nr result
ID: Angelica22_contig00017472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00017472
(912 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 372 e-120
emb|CBI24922.3| unnamed protein product [Vitis vinifera] 372 e-120
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 360 e-115
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 362 e-115
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica] 358 e-114
>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
Length = 1489
Score = 372 bits (955), Expect(2) = e-120
Identities = 181/243 (74%), Positives = 211/243 (86%), Gaps = 11/243 (4%)
Frame = +3
Query: 3 DHDGSHIKGLVINFIHTFWPSLLKVPSFMMEFITPIIKAT--NGQTVLPFYTIPEYESWK 176
DHDGSHIKGL+INFIH+FWPSLLK+PSF++EFITPI+KAT NG+ VL FY++PEYESWK
Sbjct: 535 DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHRNGR-VLSFYSMPEYESWK 593
Query: 177 ERVGNTLHDWTIKYYKGLGTSDSNEAKEYFRRIKEHQR*FLWVDDEDGDAIELAFSKKKI 356
E +G W+IKYYKGLGTS S E KEYF+ + +H++ F+WVD++DGDAIELAFSKKKI
Sbjct: 594 ESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKI 653
Query: 357 EARKNWSRQFKPGTFLDRKESLM---------LILFSIADLLRSIPSMVDGLKPGQRKIL 509
E RKNW RQF+PGT+LD+KE L+ LILFS+ADL RSIPSMVDGLKPGQRKIL
Sbjct: 654 EERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 713
Query: 510 FGSFRRNFTREARVAQFTGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLLLPKGQF 689
F SF+RNF +EA++AQF+GYVSEHSAYHHGEQSLASTI+GMAQDFVGSNNINLLLP GQF
Sbjct: 714 FCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQF 773
Query: 690 GTR 698
GTR
Sbjct: 774 GTR 776
Score = 87.0 bits (214), Expect(2) = e-120
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 778 GGKNHVSARYIYTQLSPITRCLFPKDDDILLDYLNEDGQKTEPTW 912
GGK+H SARYIYT+LSPITR LFPKDDDILLDYLNEDGQ EPTW
Sbjct: 779 GGKDHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTW 823
>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 372 bits (955), Expect(2) = e-120
Identities = 181/243 (74%), Positives = 211/243 (86%), Gaps = 11/243 (4%)
Frame = +3
Query: 3 DHDGSHIKGLVINFIHTFWPSLLKVPSFMMEFITPIIKAT--NGQTVLPFYTIPEYESWK 176
DHDGSHIKGL+INFIH+FWPSLLK+PSF++EFITPI+KAT NG+ VL FY++PEYESWK
Sbjct: 535 DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHRNGR-VLSFYSMPEYESWK 593
Query: 177 ERVGNTLHDWTIKYYKGLGTSDSNEAKEYFRRIKEHQR*FLWVDDEDGDAIELAFSKKKI 356
E +G W+IKYYKGLGTS S E KEYF+ + +H++ F+WVD++DGDAIELAFSKKKI
Sbjct: 594 ESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKI 653
Query: 357 EARKNWSRQFKPGTFLDRKESLM---------LILFSIADLLRSIPSMVDGLKPGQRKIL 509
E RKNW RQF+PGT+LD+KE L+ LILFS+ADL RSIPSMVDGLKPGQRKIL
Sbjct: 654 EERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 713
Query: 510 FGSFRRNFTREARVAQFTGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLLLPKGQF 689
F SF+RNF +EA++AQF+GYVSEHSAYHHGEQSLASTI+GMAQDFVGSNNINLLLP GQF
Sbjct: 714 FCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQF 773
Query: 690 GTR 698
GTR
Sbjct: 774 GTR 776
Score = 87.0 bits (214), Expect(2) = e-120
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 778 GGKNHVSARYIYTQLSPITRCLFPKDDDILLDYLNEDGQKTEPTW 912
GGK+H SARYIYT+LSPITR LFPKDDDILLDYLNEDGQ EPTW
Sbjct: 779 GGKDHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTW 823
>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
predicted protein [Populus trichocarpa]
Length = 1482
Score = 360 bits (925), Expect(2) = e-115
Identities = 175/243 (72%), Positives = 204/243 (83%), Gaps = 10/243 (4%)
Frame = +3
Query: 3 DHDGSHIKGLVINFIHTFWPSLLKVPSFMMEFITPIIKATNGQ-TVLPFYTIPEYESWKE 179
DHDGSHIKGL+INFIH+FWPSLLKVPSF++EFITPI+KAT+ TVL FY++PEYESWKE
Sbjct: 535 DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIVKATHRNGTVLSFYSMPEYESWKE 594
Query: 180 RVGNTLHDWTIKYYKGLGTSDSNEAKEYFRRIKEHQR*FLWVDDEDGDAIELAFSKKKIE 359
+ W+IKYYKGLGTS S E K+YF+ + +H++ FLW+D+ DGDAIELAFSKKKIE
Sbjct: 595 SLSGNASGWSIKYYKGLGTSTSKEGKDYFKNLHKHKKDFLWMDELDGDAIELAFSKKKIE 654
Query: 360 ARKNWSRQFKPGTFLDRKESLM---------LILFSIADLLRSIPSMVDGLKPGQRKILF 512
ARKNW RQ +PGT LD + ++ LILFS+ADL RSIPSMVDGLKPGQRKILF
Sbjct: 655 ARKNWLRQHEPGTHLDHNQKIIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILF 714
Query: 513 GSFRRNFTREARVAQFTGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLLLPKGQFG 692
SF+RNF +EA+V+QF+GYVSEHSAYHHGEQSLA TI+GMAQDFVGSNNINLL P GQFG
Sbjct: 715 CSFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAGTIIGMAQDFVGSNNINLLQPNGQFG 774
Query: 693 TRS 701
TRS
Sbjct: 775 TRS 777
Score = 83.2 bits (204), Expect(2) = e-115
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1
Query: 778 GGKNHVSARYIYTQLSPITRCLFPKDDDILLDYLNEDGQKTEPTW 912
GGK+H SARYIYTQLSPITR LFPKDDD LLDYL+EDGQ EPTW
Sbjct: 779 GGKDHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPTW 823
>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
predicted protein [Populus trichocarpa]
Length = 1468
Score = 362 bits (930), Expect(2) = e-115
Identities = 174/243 (71%), Positives = 207/243 (85%), Gaps = 10/243 (4%)
Frame = +3
Query: 3 DHDGSHIKGLVINFIHTFWPSLLKVPSFMMEFITPIIKATNGQ-TVLPFYTIPEYESWKE 179
DHDGSHIKGL+INF+H+FWPSLLKVPSF++EFITPI+KAT+ TVL FY++PEYESWK
Sbjct: 532 DHDGSHIKGLLINFLHSFWPSLLKVPSFLVEFITPIVKATHRNGTVLSFYSMPEYESWKG 591
Query: 180 RVGNTLHDWTIKYYKGLGTSDSNEAKEYFRRIKEHQR*FLWVDDEDGDAIELAFSKKKIE 359
+ W+IKYYKGLGTS S E K YF+ + +H++ F+W+D++DGDAIELAFSKKKIE
Sbjct: 592 SLAGNASGWSIKYYKGLGTSTSKEGKAYFQSLDKHKKDFIWMDEQDGDAIELAFSKKKIE 651
Query: 360 ARKNWSRQFKPGTFLDRKESLM---------LILFSIADLLRSIPSMVDGLKPGQRKILF 512
ARKNW RQ++PGT LD+ + L+ LILFS+ADL RSIPSMVDGLKPGQRKILF
Sbjct: 652 ARKNWLRQYEPGTHLDQNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILF 711
Query: 513 GSFRRNFTREARVAQFTGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLLLPKGQFG 692
SF+RNF +EA+++QF+GYVSEHSAYHHGEQSLASTI+GMAQDFVGSNNINLLLP GQFG
Sbjct: 712 CSFKRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFG 771
Query: 693 TRS 701
TRS
Sbjct: 772 TRS 774
Score = 81.3 bits (199), Expect(2) = e-115
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1
Query: 778 GGKNHVSARYIYTQLSPITRCLFPKDDDILLDYLNEDGQKTEPTW 912
GGK+H SARYIYTQLSPITR LFPKDDD LLDYL+EDGQ EP W
Sbjct: 776 GGKDHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNW 820
>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
Length = 1467
Score = 358 bits (919), Expect(2) = e-114
Identities = 173/244 (70%), Positives = 205/244 (84%), Gaps = 11/244 (4%)
Frame = +3
Query: 3 DHDGSHIKGLVINFIHTFWPSLLKVPSFMMEFITPIIKAT--NGQTVLPFYTIPEYESWK 176
DHDGSHIKGL+INFIH+FWPSLLK+PSF++EFITPI+KAT NG T L FY++PEYE+WK
Sbjct: 502 DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHKNGNT-LAFYSMPEYEAWK 560
Query: 177 ERVGNTLHDWTIKYYKGLGTSDSNEAKEYFRRIKEHQR*FLWVDDEDGDAIELAFSKKKI 356
E + W+IKYYKGLGTS S E ++YF+ + +H++ F+W+D+ DG+AIELAFSKKKI
Sbjct: 561 ESLRGNASGWSIKYYKGLGTSTSKEGRDYFQNLVQHKKDFIWIDERDGEAIELAFSKKKI 620
Query: 357 EARKNWSRQFKPGTFLDRKESLM---------LILFSIADLLRSIPSMVDGLKPGQRKIL 509
E RKNW RQF+PG LD+KE L+ LI FS+ADL RSIPSMVDGLKPGQRKIL
Sbjct: 621 EERKNWLRQFEPGVHLDQKEKLIKYSDFVHKELIQFSMADLQRSIPSMVDGLKPGQRKIL 680
Query: 510 FGSFRRNFTREARVAQFTGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLLLPKGQF 689
F SF+RNF +EA+VAQF+GYVSEHSAYHHGEQSLASTI+GMAQDFVGSNNINLL P GQF
Sbjct: 681 FSSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLQPNGQF 740
Query: 690 GTRS 701
GTR+
Sbjct: 741 GTRN 744
Score = 81.3 bits (199), Expect(2) = e-114
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1
Query: 778 GGKNHVSARYIYTQLSPITRCLFPKDDDILLDYLNEDGQKTEPTW 912
GGK+H SARYIYT+LSPITR LF KDDD LLDYLNEDGQ EPTW
Sbjct: 746 GGKDHASARYIYTRLSPITRFLFSKDDDRLLDYLNEDGQSIEPTW 790