BLASTX nr result

ID: Angelica22_contig00017460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017460
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   104   4e-20
ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr...   103   7e-20
emb|CBI36850.3| unnamed protein product [Vitis vinifera]              102   3e-19
ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box pr...    94   7e-17
ref|XP_002320346.1| f-box family protein [Populus trichocarpa] g...    94   1e-16

>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  104 bits (260), Expect = 4e-20
 Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
 Frame = +1

Query: 712  TMATVDFFSNLSDDLLIKIIFGL--DLKDWGRLACVSKKSCSILHDSCYEIKCTQTHPAL 885
            TM     FS LSDD+++ I+F L  D + W RLACV  K  S++ + C++ KC+QT P++
Sbjct: 392  TMGNETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTXPSI 451

Query: 886  VSDLLSNTVSSTPPGGWAALFKVLFCCPGLAQVGVRVEVSPTNAVNDAGDDDNSMLGSHL 1065
            V+DL S    S+PPGGWAAL K+  CCPGL   GV +E S      + G D++       
Sbjct: 452  VADLFSGPGDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDED------- 504

Query: 1066 LYEQLG-FSCVMGSHLDWRRLGLSCEQGNKLLDD*FSRNCSHVSASGIYF 1212
             Y + G F   +G          S   GN  + D    +CS      +YF
Sbjct: 505  -YRKAGSFQITVGDATTPAVASSSHHDGNSEVSD----SCSWSLFDDLYF 549


>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
            vinifera]
          Length = 330

 Score =  103 bits (258), Expect = 7e-20
 Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
 Frame = +1

Query: 712  TMATVDFFSNLSDDLLIKIIFGL--DLKDWGRLACVSKKSCSILHDSCYEIKCTQTHPAL 885
            TM     FS LSDD+++ I+F L  D + W RLACV  K  S++ + C++ KC+QT P++
Sbjct: 2    TMGNETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSI 61

Query: 886  VSDLLSNTVSSTPPGGWAALFKVLFCCPGLAQVGVRVEVSPTNAVNDAGDDDNSMLGSHL 1065
            V+DL S    S+PPGGWAAL K+  CCPGL   GV +E S      + G D++       
Sbjct: 62   VADLFSGPGDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDED------- 114

Query: 1066 LYEQLG-FSCVMGSHLDWRRLGLSCEQGNKLLDD*FSRNCSHVSASGIYF 1212
             Y + G F   +G          S   GN  + D    +CS      +YF
Sbjct: 115  -YRKAGSFQITVGDATTPAVASSSHHDGNSEVSD----SCSWSLFDDLYF 159


>emb|CBI36850.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  102 bits (253), Expect = 3e-19
 Identities = 61/162 (37%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
 Frame = +1

Query: 712  TMATVDFFSNLSDDLLIKIIFGL--DLKDWGRLACVSKKSCSILHDSCYEIKCTQTHPAL 885
            TM     FS LSDD+++ I+F L  D + W RLACV  K  S++ + C++ KC+QT P++
Sbjct: 54   TMGNETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSI 113

Query: 886  VSDLLSNTVSSTPPGGWAALFKVLFCCPGLAQVGVRVEVSPTNAVNDAGDDDNSMLGSHL 1065
            V+DL S    S+PPGGWAAL K+  CCPGL   G      P                   
Sbjct: 114  VADLFSGPGDSSPPGGWAALHKLSVCCPGLLHSGTVKSCRP------------------- 154

Query: 1066 LYEQLGFSCVMGSHLDWRRLGLSCEQGNKLLDD*FSRNCSHV 1191
                      + SHL      LS EQGNKLL   F  +C ++
Sbjct: 155  ----------LRSHLASGVWNLSREQGNKLLASRFRGDCLYI 186


>ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box protein-like [Cucumis
            sativus]
          Length = 379

 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
 Frame = +1

Query: 733  FSNLSDDLLIKIIFGL--DLKDWGRLACVSKKSCSILHDSCYEIKCTQTHPALVSDLLSN 906
            FS L DD+L+ I F L  D ++W RLACVS K    + + C++ KC+   P+LVSDLL  
Sbjct: 51   FSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVG 110

Query: 907  TVSSTPPGGWAALFKVLFCCPGLAQVGVRVEVSPTNAVNDAGDDDNSM-LGS 1059
               S P GGWA+L K+  CCPGL   GV +E S      + G D+N M LGS
Sbjct: 111  --DSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGS 160


>ref|XP_002320346.1| f-box family protein [Populus trichocarpa]
            gi|222861119|gb|EEE98661.1| f-box family protein [Populus
            trichocarpa]
          Length = 334

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +1

Query: 715  MATVDFFSNLSDDLLIKIIFGL--DLKDWGRLACVSKKSCSILHDSCYEIKCTQTHPALV 888
            M     FS LS+D+++ I+  L  D ++W RLACV  +  S++ D C+  KC +T P++V
Sbjct: 1    MTVTTDFSRLSEDVVLNILSKLEDDPRNWARLACVCSRFSSLVRDICWRSKCNKTIPSVV 60

Query: 889  SDLLSNTVSSTPPGGWAALFKVLFCCPGLAQVGVRVEVSPTNAVNDAGDDD 1041
            +DLL +  SS  PGGW+AL+K+  CCPGL   GV +E+S      + G DD
Sbjct: 61   ADLLPSPDSSF-PGGWSALYKLAVCCPGLLHAGVLLELSDFGLERELGPDD 110


Top