BLASTX nr result

ID: Angelica22_contig00017348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017348
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   154   4e-35
emb|CBI34365.3| unnamed protein product [Vitis vinifera]              146   1e-32
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   144   4e-32
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   143   8e-32
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...   141   3e-31

>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
            predicted protein [Populus trichocarpa]
          Length = 208

 Score =  154 bits (389), Expect = 4e-35
 Identities = 75/119 (63%), Positives = 88/119 (73%)
 Frame = -2

Query: 1109 RQGRSVSPPKSGLPAEXXXXXXXXXXXXXXXXXRDSGDVVNPGNNLYIMGLSTRVTSTDL 930
            R+GRSVSP  SG P                    DSGD  NPGNNLY+ GLSTRVTS+DL
Sbjct: 5    REGRSVSPRNSGSPGRGRRSRSLSRSRRSRSRSNDSGDASNPGNNLYVTGLSTRVTSSDL 64

Query: 929  EKFFGNEGKVTDCHLVKDPQTKESRGFAFVTMETNEDAERCIKHLNRTVLEGRLVTVEK 753
            EK+F +EGKV +CHLV DP+T+ESRGFAFVTMET EDA RC+K+LNR+VLEGR++TVEK
Sbjct: 65   EKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANRCVKYLNRSVLEGRVITVEK 123


>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  146 bits (368), Expect = 1e-32
 Identities = 76/126 (60%), Positives = 89/126 (70%), Gaps = 6/126 (4%)
 Frame = -2

Query: 1109 RQGRSVSPPKSGLPAEXXXXXXXXXXXXXXXXXR------DSGDVVNPGNNLYIMGLSTR 948
            R+GRSVSP  SG P                   R      DS D VNPGNNLY+ GLSTR
Sbjct: 5    REGRSVSPANSGSPIRGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTR 64

Query: 947  VTSTDLEKFFGNEGKVTDCHLVKDPQTKESRGFAFVTMETNEDAERCIKHLNRTVLEGRL 768
            V ++DLEK+F +EGKV +CHLV DP+T+ESRGF FVTMET EDA+RCIK+LNR+VLEGRL
Sbjct: 65   VNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRL 124

Query: 767  VTVEKV 750
            +TVEKV
Sbjct: 125  ITVEKV 130


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
            vinifera]
          Length = 211

 Score =  144 bits (364), Expect = 4e-32
 Identities = 75/125 (60%), Positives = 88/125 (70%), Gaps = 6/125 (4%)
 Frame = -2

Query: 1109 RQGRSVSPPKSGLPAEXXXXXXXXXXXXXXXXXR------DSGDVVNPGNNLYIMGLSTR 948
            R+GRSVSP  SG P                   R      DS D VNPGNNLY+ GLSTR
Sbjct: 5    REGRSVSPANSGSPIRGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTR 64

Query: 947  VTSTDLEKFFGNEGKVTDCHLVKDPQTKESRGFAFVTMETNEDAERCIKHLNRTVLEGRL 768
            V ++DLEK+F +EGKV +CHLV DP+T+ESRGF FVTMET EDA+RCIK+LNR+VLEGRL
Sbjct: 65   VNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRL 124

Query: 767  VTVEK 753
            +TVEK
Sbjct: 125  ITVEK 129


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
            gi|223549733|gb|EEF51221.1| Arginine/serine-rich-splicing
            factor, putative [Ricinus communis]
          Length = 204

 Score =  143 bits (361), Expect = 8e-32
 Identities = 75/119 (63%), Positives = 87/119 (73%)
 Frame = -2

Query: 1109 RQGRSVSPPKSGLPAEXXXXXXXXXXXXXXXXXRDSGDVVNPGNNLYIMGLSTRVTSTDL 930
            R+GRS SP  S  PA+                 R S D  NPGNNLY+ GLSTRVT+ DL
Sbjct: 5    REGRSASPRASISPAKARRSRSLSRSRRSRSRSR-SVDAANPGNNLYVTGLSTRVTTGDL 63

Query: 929  EKFFGNEGKVTDCHLVKDPQTKESRGFAFVTMETNEDAERCIKHLNRTVLEGRLVTVEK 753
            EK+FG EGKV +CHLV DP+T+ESRGFAFVTMET EDAERC+K+LNR+VLEGRL+TVEK
Sbjct: 64   EKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAERCVKYLNRSVLEGRLITVEK 122


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
            [Glycine max]
          Length = 191

 Score =  141 bits (356), Expect = 3e-31
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -2

Query: 1007 DSGDVVNPGNNLYIMGLSTRVTSTDLEKFFGNEGKVTDCHLVKDPQTKESRGFAFVTMET 828
            DS DV NPGNNLY+ GLSTR+T +DL K+F  EGKV DCHLVKDP TKESRGF FVTMET
Sbjct: 37   DSADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMET 96

Query: 827  NEDAERCIKHLNRTVLEGRLVTVEK 753
            N+DAE CIK+LNR+V EGRL+TVEK
Sbjct: 97   NDDAECCIKYLNRSVFEGRLITVEK 121


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