BLASTX nr result
ID: Angelica22_contig00017318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00017318
(358 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2... 142 4e-32
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi... 141 6e-32
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ... 139 2e-31
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,... 136 2e-30
>ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 142 bits (357), Expect = 4e-32
Identities = 66/117 (56%), Positives = 88/117 (75%)
Frame = +1
Query: 4 EFLSGCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIID 183
E + GC++H ++K+GW+ A+EANNSILSF+A+L + +K+ ES+ TQVSWNAIID
Sbjct: 87 ELVYGCMMHAVVIKTGWSSAMEANNSILSFYAKLGSLNDAVKVFESMGTLTQVSWNAIID 146
Query: 184 AYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
+MK GDT +A +F+ PDKN+VSWTSMI+GYARN G EA+ FF MIRN L P+
Sbjct: 147 VFMKAGDTSEAFLSFQRMPDKNVVSWTSMITGYARNGYGEEALDFFVGMIRNCLLPD 203
>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Glycine max]
Length = 629
Score = 141 bits (355), Expect = 6e-32
Identities = 66/115 (57%), Positives = 85/115 (73%)
Frame = +1
Query: 4 EFLSGCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIID 183
E L GC+VHG ++KSGW+ A+E NS+LSF+A+L D +K+ S QVSWNAIID
Sbjct: 220 EMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAIID 279
Query: 184 AYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQ 348
A+MKLGDTQKA AF++AP++NIVSWTSMI+GY RN G A+ F D+ RN +Q
Sbjct: 280 AHMKLGDTQKAFLAFQKAPERNIVSWTSMIAGYTRNGNGELALSMFLDLTRNSVQ 334
Score = 55.5 bits (132), Expect = 5e-06
Identities = 27/113 (23%), Positives = 55/113 (48%)
Frame = +1
Query: 16 GCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIIDAYMK 195
G +H +V SG+ ++ NS++ + + D K+ + +V+W +++ AY
Sbjct: 92 GATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYAN 151
Query: 196 LGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
AL F P++ +++W MI G+AR + + F++M + QP+
Sbjct: 152 SCRLGVALELFRSMPERVVIAWNIMIVGHARRGEVEACLHLFKEMCGSLCQPD 204
>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510628|gb|AES91770.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 665
Score = 139 bits (351), Expect = 2e-31
Identities = 67/115 (58%), Positives = 84/115 (73%)
Frame = +1
Query: 4 EFLSGCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIID 183
E L GC++H ++KSGW+ A+E NNSI+SF+A+L H +K+ S QVSWNAIID
Sbjct: 219 ESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIID 278
Query: 184 AYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQ 348
A+MK+GDTQKAL AF++AP+KNIVSWTSMI GY RN G A+ F DM RN Q
Sbjct: 279 AHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQ 333
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/113 (22%), Positives = 56/113 (49%)
Frame = +1
Query: 16 GCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIIDAYMK 195
G +H +V SG+ ++ N+++ + + + + K+ + + Y +V+W +++ AY
Sbjct: 91 GTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYAN 150
Query: 196 LGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
A F P+K ++W +I+ +AR + + F++M N QP+
Sbjct: 151 TCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPD 203
Score = 54.7 bits (130), Expect = 8e-06
Identities = 23/62 (37%), Positives = 40/62 (64%)
Frame = +1
Query: 169 NAIIDAYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQ 348
N++I+ Y K GD + + A DK++VSW SM+ + N +G EA+ FR+M+ +G++
Sbjct: 375 NSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVR 434
Query: 349 PN 354
P+
Sbjct: 435 PD 436
>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 139 bits (351), Expect = 2e-31
Identities = 64/113 (56%), Positives = 87/113 (76%)
Frame = +1
Query: 16 GCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIIDAYMK 195
G ++HG I+KSGW AVE +NSILSF+++L D V+K+ ES+ TQVSWNA+IDA+MK
Sbjct: 222 GYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMK 281
Query: 196 LGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
+GDT +A F+ AP+KN+VSWTSMI+GYARN G +A+ FF M+ N +QP+
Sbjct: 282 IGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPD 334
Score = 56.6 bits (135), Expect = 2e-06
Identities = 30/117 (25%), Positives = 53/117 (45%)
Frame = +1
Query: 4 EFLSGCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIID 183
E G +H +V SG ++ NS++ + + ++ E + +VSW +++
Sbjct: 86 ELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLF 145
Query: 184 AYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
AY G A F+ P K ++W MISGY + + F+ M + LQP+
Sbjct: 146 AYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPD 202
>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 623
Score = 136 bits (342), Expect = 2e-30
Identities = 65/117 (55%), Positives = 85/117 (72%)
Frame = +1
Query: 4 EFLSGCVVHGHIVKSGWALAVEANNSILSFFARLSHHDGVIKMLESVEYRTQVSWNAIID 183
EFLSGC++HG +++SGW+ A+EA NSILS +A+ + +K++ES TQVSWNAIID
Sbjct: 218 EFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIID 277
Query: 184 AYMKLGDTQKALYAFEEAPDKNIVSWTSMISGYARNAQGVEAVRFFRDMIRNGLQPN 354
AYMK+G +A F+ P+KNIVSWTSMI+GYARN G EA+RFF M N P+
Sbjct: 278 AYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPD 334