BLASTX nr result

ID: Angelica22_contig00017173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00017173
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   298   5e-79
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   295   6e-78
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   294   1e-77
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   283   3e-74

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  303 bits (777), Expect = 2e-80
 Identities = 163/234 (69%), Positives = 184/234 (78%), Gaps = 12/234 (5%)
 Frame = +1

Query: 19  SEIPLPSNDQSALPSNASSVPEVEKIM-DRRNEYPT-----------GISNLVNGHSSRV 162
           +E+ + S     LP+   S    +  M DRRN  PT           G SNL +     +
Sbjct: 159 TELAVNSRHSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKGTSNLPDCSLQPI 218

Query: 163 RTAPIVVHVSRPMEIENTRKGLPIVMMEQEIMEAINENISVILCGETGCGKTTQVPQFLY 342
            T P VVHVSRP E+EN RK LPIVMMEQEIMEAIN++ +VI+CGETGCGKTTQVPQFLY
Sbjct: 219 -TTPTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQVPQFLY 277

Query: 343 EAGFGSSRSSVNSGMIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKRIGDNCS 522
           EAGFGS ++SV SG+IGVTQPRRVAVLATAKRVAFELGL LGKEVGFQVRHDK IGD+CS
Sbjct: 278 EAGFGSKQASVQSGIIGVTQPRRVAVLATAKRVAFELGLSLGKEVGFQVRHDKMIGDSCS 337

Query: 523 IKFMTDGILLRELQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIQERQRI 684
           IKFMTDGILLRE+QNDF L+RYSVIILDEAHERSLNTDILIGMLSR+IQ RQ++
Sbjct: 338 IKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQKL 391


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  298 bits (764), Expect = 5e-79
 Identities = 163/249 (65%), Positives = 185/249 (74%), Gaps = 26/249 (10%)
 Frame = +1

Query: 16   NSEIPLPSNDQSALPSNASSVPEVEKIM-DRRNEYPT----------------------- 123
            ++E+ + S     LP+   S    +  M DRRN  PT                       
Sbjct: 263  STELAVNSRHSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKSKDVPDWNLNLN 322

Query: 124  --GISNLVNGHSSRVRTAPIVVHVSRPMEIENTRKGLPIVMMEQEIMEAINENISVILCG 297
              G SNL +     + T P VVHVSRP E+EN RK LPIVMMEQEIMEAIN++ +VI+CG
Sbjct: 323  FRGTSNLPDCSLQPI-TTPTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICG 381

Query: 298  ETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAKRVAFELGLHLGKEV 477
            ETGCGKTTQVPQFLYEAGFGS ++SV SG+IGVTQPRRVAVLATAKRVAFELGL LGKEV
Sbjct: 382  ETGCGKTTQVPQFLYEAGFGSKQASVQSGIIGVTQPRRVAVLATAKRVAFELGLSLGKEV 441

Query: 478  GFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAHERSLNTDILIGMLS 657
            GFQVRHDK IGD+CSIKFMTDGILLRE+QNDF L+RYSVIILDEAHERSLNTDILIGMLS
Sbjct: 442  GFQVRHDKMIGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLS 501

Query: 658  RIIQERQRI 684
            R+IQ RQ++
Sbjct: 502  RVIQVRQKL 510


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  295 bits (755), Expect = 6e-78
 Identities = 158/229 (68%), Positives = 180/229 (78%), Gaps = 7/229 (3%)
 Frame = +1

Query: 16  NSEIPLPSNDQSALPSNASSVPEVEK---IMDRRNEYPT----GISNLVNGHSSRVRTAP 174
           N +   P+ +     S ASS  +  K   +M + NE  T      SN  +    R  T P
Sbjct: 93  NEDNCTPTLEVPKKSSQASSDHDARKTSSLMGKLNESSTVDLGKASNFPDFPLPRPPTTP 152

Query: 175 IVVHVSRPMEIENTRKGLPIVMMEQEIMEAINENISVILCGETGCGKTTQVPQFLYEAGF 354
            VVHVSRP E+E  RK LPI+MMEQEIMEAINE+ +VI+CGETGCGKTTQVPQFLYEAG+
Sbjct: 153 TVVHVSRPDEVEKKRKDLPIIMMEQEIMEAINEHSTVIICGETGCGKTTQVPQFLYEAGY 212

Query: 355 GSSRSSVNSGMIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFM 534
           GS+ S V +G+IGVTQPRR+AVLATA+RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFM
Sbjct: 213 GSNHSVVRNGVIGVTQPRRIAVLATARRVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFM 272

Query: 535 TDGILLRELQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIQERQR 681
           TDGILLRE+Q D LLKRYSVIILDEAHERS+NTDILIGMLSR+IQ RQ+
Sbjct: 273 TDGILLREVQTDILLKRYSVIILDEAHERSVNTDILIGMLSRVIQLRQK 321


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355506130|gb|AES87272.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1331

 Score =  294 bits (753), Expect = 1e-77
 Identities = 154/223 (69%), Positives = 183/223 (82%), Gaps = 6/223 (2%)
 Frame = +1

Query: 34  PSNDQSALPSNASSVPEVEKI--MDRRNEYPTG----ISNLVNGHSSRVRTAPIVVHVSR 195
           P   +S+ P++ S + +++     DR+NE PT     +SNL +  + R  T P VVHV R
Sbjct: 203 PDEIRSSSPTSRS-IDDIKSTNSKDRKNENPTTNFNELSNLPHVSTQRPLTTPTVVHVYR 261

Query: 196 PMEIENTRKGLPIVMMEQEIMEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSV 375
           P E++  RK LPIVMMEQEIMEAIN N SVI+CGETGCGKTTQVPQFLYEAG+GSS+   
Sbjct: 262 PPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCGKTTQVPQFLYEAGYGSSKFHA 321

Query: 376 NSGMIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLR 555
            SG+IGVTQPRRVAVLATAKRVA+ELG+ LGKEVGFQVR+DK+IG+NCSIKFMTDGILLR
Sbjct: 322 RSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLR 381

Query: 556 ELQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIQERQRI 684
           E+QND LL+RYSV+ILDEAHERSLNTDILIGMLSR+I+ RQ+I
Sbjct: 382 EVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKI 424


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
           max]
          Length = 1380

 Score =  283 bits (723), Expect = 3e-74
 Identities = 154/237 (64%), Positives = 181/237 (76%), Gaps = 9/237 (3%)
 Frame = +1

Query: 1   EIYSENSEIPLPSNDQSALPSNASSVPE--VEKIMDRRNEYPTG-------ISNLVNGHS 153
           E Y   SE P   +  + L    SS     +++I   +++Y T        +SNL    +
Sbjct: 240 ETYKYVSEHPTDISIDNHLDEIRSSPMSCSIDEIKGTKSKYRTNENHNSNELSNLPGYSA 299

Query: 154 SRVRTAPIVVHVSRPMEIENTRKGLPIVMMEQEIMEAINENISVILCGETGCGKTTQVPQ 333
            R    P VVHV RP E+E+ RK LPIVMMEQEIMEAIN+  SVI+CGETGCGKTTQVPQ
Sbjct: 300 PRRSNVPTVVHVYRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICGETGCGKTTQVPQ 359

Query: 334 FLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKRIGD 513
           FLYEAG+GSS+     G+IGVTQPRRVAVLATAKRVA+ELGLHLGKEVGFQVR+DK+IG+
Sbjct: 360 FLYEAGYGSSK-----GIIGVTQPRRVAVLATAKRVAYELGLHLGKEVGFQVRYDKKIGE 414

Query: 514 NCSIKFMTDGILLRELQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIQERQRI 684
           +CSIKFMTDGILLRE+QND LL+RYSV+ILDEAHERSLNTDILIGMLSR+I+ RQ I
Sbjct: 415 SCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIKTRQMI 471


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